Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03792 ATGATAGCACTTGGATCCTCAATACTTGTTGTGGTCTTGCTTGGACTAATTTATATATTTTTAGTTAGAAAGTCTAAGCAAGAAGCCGTTATCACTGAGGAAGATGGTTCTTCAGACCTTTTGAAGAAAGTGATGAAAGCTACAGCGAATCTAAATGATGAGTATATTATAGGAAGAGGAGCTGAAGGAGTTATTTACAAAGCTGCAATAGGTCCAGACAACATTTTAGCAGTGAAGAAGCTTGTATTTGGTGAAAATGAACGAAAACGAGTAAGCATGTTAAGAGAAGTTGAAGCACTTTCAAAGATTAGGCATAGAAATTTGATTTTGGATCAGTCTTCTAGTTCTTCTGCAACACAGTCAATAAATGTTTCTGGCACACTTGGTTACATTGCACCAGAGAATGCATATACAACAGTAATGGGAAAGGAGTCTGATGTATACAGTTATGGAGTAGTTTTGCTTGAGTTGATATCAAGAAAGAAGGCAATAGATCCATCATTTATGGAAGGAATGGATATAGTTACTTGGGTGAGATCTTTGTGGGAGGAAACAGGAGTTGTTGATGAAATTGCTGATTCAGAACTTGCCAATGAGATATCTAATTATGATTCTAATAAAGTGATGAAAGAAGTAACCAATGTGCTTTTGGTGGCTTTGAGATGTACAGAAAGGGATCCACGCCGGAGACCTACAATGAGAGATGTTATCAAACATTTGTTGTAG 726 0.3678 MIALGSSILVVVLLGLIYIFLVRKSKQEAVITEEDGSSDLLKKVMKATANLNDEYIIGRGAEGVIYKAAIGPDNILAVKKLVFGENERKRVSMLREVEALSKIRHRNLILDQSSSSSATQSINVSGTLGYIAPENAYTTVMGKESDVYSYGVVLLELISRKKAIDPSFMEGMDIVTWVRSLWEETGVVDEIADSELANEISNYDSNKVMKEVTNVLLVALRCTERDPRRRPTMRDVIKHLL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03792 241 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 109 - -
Mepo4g03792 241 SUPERFAMILY Protein kinase-like (PK-like) 38 240 IPR011009 -
Mepo4g03792 241 Pfam Protein tyrosine and serine/threonine kinase 118 240 IPR001245 GO:0004672|GO:0006468
Mepo4g03792 241 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03792 241 Gene3D Phosphorylase Kinase; domain 1 19 109 - -
Mepo4g03792 241 Gene3D Transferase(Phosphotransferase) domain 1 110 241 - -
Mepo4g03792 241 SMART serkin_6 51 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03792 Mepo-Chr4 47286403 47287545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03792 109 240 Receptor kinase-like Gene Family AT1G73080 50.365 8.87e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g03792 PK_Tyr_Ser-Thr 5.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03792 - - gmx:100802056 194.126