Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03789 ATGAACTACACTTCCAATATTTCTGACAACCCTTCAGATAACTCAAATGTATTAGTATATTATTTTATTGGTTTTTCATTTGCCATTACCCTCGTGATGATGTTCATGTCTCTATTTTCATGTTATTGGCAAAACATGCTACAATCTAGTGGCATCAATTCTAACAGAGATCATACTACTGAAGTGAATATTGAAATAAGCGAGGAAGAAAGAGATTTTATTCCAAACAGTTACCCCATTTTGTTGTACTCCCAAGTCAAGTTTCCTAAGCCTAATGATTCAACATTACTCATTTGCTCAATTTGTTTGGGAGATTATAAAGATTCAGAGTGGTTGCGCTCTTTACCTGATTGTGGTCACTTTTTTCATATGGAGTGTATTGCTGCATGGTTTAGGTTAAACCTCTCATGTCCCCTATGTCGAAACTTGCCAATCCCAACTCCCTATTCCGAAGTTTCACTCTTGGCAACTACACATAATTGA 483 0.3602 MNYTSNISDNPSDNSNVLVYYFIGFSFAITLVMMFMSLFSCYWQNMLQSSGINSNRDHTTEVNIEISEEERDFIPNSYPILLYSQVKFPKPNDSTLLICSICLGDYKDSEWLRSLPDCGHFFHMECIAAWFRLNLSCPLCRNLPIPTPYSEVSLLATTHN 160
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03789 160 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 150 IPR045899 -
Mepo4g03789 160 SUPERFAMILY RING/U-box 74 144 - -
Mepo4g03789 160 Pfam Ring finger domain 99 141 IPR001841 -
Mepo4g03789 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 145 IPR013083 -
Mepo4g03789 160 SMART ring_2 99 140 IPR001841 -
Mepo4g03789 160 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo4g03789 Mepo-Chr4 47268942 47269424 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03789 21 158 C3H Transcription Factor Family AT2G35910 41.333 1.96e-27 100
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03789 - - adu:107466513 138.658