Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03777 ATGACAACATCAGAAGAAACTTCAAGTTTGACACAATTGAGCCAACATCTTTTAGAGGATGTATCAGACTCATTCTTCACCAATCTCAGTTGTGTAAAACTTGAAAACACATCATCATCACCAGAAATTGATTTGGATTCATACTTTTCAGAACATAGTTTTCTTGAAATCCTTGGTTTTGAAGCTAATACAAAACTTATTGACTTCACTTCTCATGATAAGGTACACAACTTGCATGAAGAAAGTCCCTTAGAGGAAACTCAAAAGAAGTCCAATTTGGAAGAATCAATGGTGTTGGAGAAGAAGGAACAAAGAAGTTATGGAACAAGGCACTACAGAGGAGTGAGGAGAAGGCCATGGGGAAAATATGCTGCAGAAATTCGTGATCCGACAAGGAAAGGAAGCAGGGTTTGGTTAGGAACATTTGACAAAGAGATTGATGCTGCCAAGGCTTATGATTGTGCAGCTTTCAGAATGAGGGGTCAGAAAGCCATATTGAATTTTCCTTTGGAGGCTGGTGAAGCTAATCCAAAGCCTAATAACTGTGGCAGGAAAAGGAGAATACATCAAAGATATGATGCTACAAGTTGA 591 0.3858 MTTSEETSSLTQLSQHLLEDVSDSFFTNLSCVKLENTSSSPEIDLDSYFSEHSFLEILGFEANTKLIDFTSHDKVHNLHEESPLEETQKKSNLEESMVLEKKEQRSYGTRHYRGVRRRPWGKYAAEIRDPTRKGSRVWLGTFDKEIDAAKAYDCAAFRMRGQKAILNFPLEAGEANPKPNNCGRKRRIHQRYDATS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03777 196 PANTHER DNA-BINDING DOMAIN 83 176 IPR044808 GO:0003700|GO:0009873
Mepo4g03777 196 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 PRINTS Ethylene responsive element binding protein signature 151 171 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 FunFam Ethylene-responsive transcription factor 2 110 171 - -
Mepo4g03777 196 SUPERFAMILY DNA-binding domain 111 171 IPR016177 GO:0003677
Mepo4g03777 196 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 CDD AP2 111 169 IPR001471 GO:0003700|GO:0006355
Mepo4g03777 196 MobiDBLite consensus disorder prediction 175 196 - -
Mepo4g03777 196 Gene3D AP2/ERF domain 110 171 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03777 Mepo-Chr4 47174543 47175503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03777 1 187 AP2-EREBP Transcription Factor Family AT5G07580 42.079 9.04e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03777 AP2 9.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03777 - - gmx:100499732 218.009