Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03749 ATGCTTGGGATTCTCCACTTTTCAGAACAACTGCTGGATGTTGAAAGGTTACCATTGCTTGTTGCAATTTCTGGCCAAGTTGTTTCTGAAACCCCAATTGAGTGCGAGATAACTGGTTTAAGAGGTGTAATAGTTGAAGAAAGAGATGATGGGACTGGTCGTGTGCTTGTGGTTGGAGCTCGTGGTGGCACTGGTTTTGTATTGCCTGCTGGAAACTCAACATTTGAAAAGTTGGAGCAGACACAAATAAATGAAACATCGGACCATATTCAACTTATAAAGATCAAGGGATTGAAGAGGATTGAACAGGTACTTCCGGTTGGAACTGCTTTGACTGTTGTTGGTCAGGCCTCTAAAGATGATGACGGGACCATTCGAATTCAGCGACCTCCCAAAGGGCCATTTTATGTCTCTAGCAAAGCGATAGATGAACACACTGCAAAATTTGTGAATTATGCTAGGTTGCTTTACTTTATAGTTGTTTTTTGTGTTTTGGTCTACAACATTGTTTTACTGACTAAAATCTATTATTAG 534 0.4045 MLGILHFSEQLLDVERLPLLVAISGQVVSETPIECEITGLRGVIVEERDDGTGRVLVVGARGGTGFVLPAGNSTFEKLEQTQINETSDHIQLIKIKGLKRIEQVLPVGTALTVVGQASKDDDGTIRIQRPPKGPFYVSSKAIDEHTAKFVNYARLLYFIVVFCVLVYNIVLLTKIYY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03749 177 Pfam E3 Ubiquitin ligase 49 166 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mepo4g03749 177 PANTHER - 9 48 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03749 Mepo-Chr4 46995529 46997105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03749 12 174 C3H Transcription Factor Family AT1G63900 43.878 1.92e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03749 K15688 - mtr:25484806 254.988