Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03747 ATGGCGATGGTTCCATGGCGTGGCATCGGTTGTTGTTTGAGTTCTGCTGCTCTTTACCTTCTCGGTAGAACCACTGACAGGGATATTGAAATTCTTAAATCCGTTAACCGGGTTAATCAGCTGAGGGAGCTAGCACAACTGTTGGATGAAGAAATATTTCCCTTGGTTGTTGCAATTTCTGGAAGAGTGGGTTCTGAAACTCCAATTAGCTGCGAGTTCAGTGGTTTAAGAGGTGTTATAGTTGAGGAAACAGCAGAGCAACATTTTCTCAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCGTTAATGCAATCCAGGAGTAACGAAGTTCCTTGGTATCTGGATGATGGAACTGATCGTGTGCGTGTACTTGGAGCTCAGGGTGCTACTGGTCTTGTACTGTCTGTTGGACGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGCGGAACATTGGATTATCTACAAGGTCTAAAGTTGCTTGGAGTTAAAAGAATTGAACGGTTACTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGACGATGTCGGAACCATTCGAATTCAGCGACCCTCCAAAGGGCCATTTTATGTCTCTCCCAAAACAATTGACGAACTCATTGCAAATCTTGGGAGATGGGCGAGGTGGTATAAGTGCGCCTCTGCGGGCTTGACAGTGTTGAGTGTTTTTATGATAGCCAATCATGCTATTCGATACATCATGGAAAGACGACGTCGCAACGAATTGGAAAAAAGGGTTCTCGCTGCAGCTGCTAAGATATCTGGACAAGATAATGGAGGTGAAATGGATGACAGTTTATCAGATGGTGCTAAAAGGGAACGTGCAATGCCAAATTTGTGTGTAATATGCCTCGAGCAGGAATATAATTCTGTTTTTGTCCCGTGTGGGCATATGTGCTGCTGTACAGCTTGCTCTTCGCACTTGACCAGTTGTCCTCTTTGCCGGAGACATATAGAGAAGGCGGTAAAGACTTTCCGTCATTGA 1026 0.4503 MAMVPWRGIGCCLSSAALYLLGRTTDRDIEILKSVNRVNQLRELAQLLDEEIFPLVVAISGRVGSETPISCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMQSRSNEVPWYLDDGTDRVRVLGAQGATGLVLSVGREAFEESGRSLVRGTLDYLQGLKLLGVKRIERLLPVGTSLTVVGEAAKDDVGTIRIQRPSKGPFYVSPKTIDELIANLGRWARWYKCASAGLTVLSVFMIANHAIRYIMERRRRNELEKRVLAAAAKISGQDNGGEMDDSLSDGAKRERAMPNLCVICLEQEYNSVFVPCGHMCCCTACSSHLTSCPLCRRHIEKAVKTFRH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03747 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 340 IPR013083 -
Mepo4g03747 341 Pfam E3 Ubiquitin ligase 87 237 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mepo4g03747 341 Pfam Zinc finger, C3HC4 type (RING finger) 292 334 - -
Mepo4g03747 341 PANTHER - 3 308 IPR044231 GO:0004842|GO:0016567
Mepo4g03747 341 SUPERFAMILY RING/U-box 293 335 - -
Mepo4g03747 341 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
Mepo4g03747 341 FunFam Baculoviral IAP repeat containing 7 303 339 - -
Mepo4g03747 341 FunFam E3 ubiquitin-protein ligase SP1 282 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03747 Mepo-Chr4 46978263 46983128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03747 3 266 C3H Transcription Factor Family AT1G63900 70.677 1.53e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03747 K15688 - gmx:100803252 575.089