Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03743 ATGATTTCAATAGAAACTAAAGTTTGGCGTAAAGGACCATATGAGAAGCCAATCTTGTGTAACGCTTGTGGATTGCATTTCAAGGCTAAAGGAACCCTTGAAAACTATCTCCCGAAGATAGCCCAGCGAAATCTGTCATCAGACCATGACATTGAAAAAGCATCTAGAAGTGACCCAAAGCTTTCAAACCAAACTCCAGAGAGGTCGACACCAATGGAGACACTGACATCAATGGAGGAGTTTCAACAAAAGCTTCGCGATCTATGGGAATCTGAGAAAGAAGCAAGTGAATCATCTTCAGACAATATTTTGTTGTTTGATAATATGAACAACTTTATACCAAGTAAGTCTTGA 354 0.3927 MISIETKVWRKGPYEKPILCNACGLHFKAKGTLENYLPKIAQRNLSSDHDIEKASRSDPKLSNQTPERSTPMETLTSMEEFQQKLRDLWESEKEASESSSDNILLFDNMNNFIPSKS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03743 117 Pfam GATA zinc finger 4 32 IPR000679 GO:0006355|GO:0043565
Mepo4g03743 117 PANTHER OSJNBB0038F03.10 PROTEIN 5 66 IPR044589 -
Mepo4g03743 117 MobiDBLite consensus disorder prediction 58 75 - -
Mepo4g03743 117 CDD ZnF_GATA 3 32 IPR000679 GO:0006355|GO:0043565
Mepo4g03743 117 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 35 - -
Mepo4g03743 117 Gene3D - 3 66 IPR013088 GO:0006355|GO:0008270
Mepo4g03743 117 SMART GATA_3 3 44 IPR000679 GO:0006355|GO:0043565
Mepo4g03743 117 MobiDBLite consensus disorder prediction 47 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03743 Mepo-Chr4 46918922 46921464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03743 6 56 C2C2-Gata Transcription Factor Family AT4G17570 47.059 1.47e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo4g03743 GATA 1.2e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03743 - - psat:127115742 99.7525