Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03739 ATGGAGGTGATAGACAAGGGTATTATAGTGGCTGAAGAAATGGATAAAACTGTTGGTTCTGAACAAGGTTGTAATTACAAGAGAAAATTAGATGATGAGTCTTCTTCAATGGTTACCGAAGATGGTTCCTTAAGCATGGAGGATGATTTCCCTCCCTATGAATTTACAAATCCGCAAAGCTTCGATTCAGCGGAATTTGGGTTAGGTTGTTGTACAGAAGAACAACAGTTGGGTGTGCTCGAGGTTGAAGATTGGAAGGATCCTATGGCAACTCAGCTTGAGGACTTACTGATGAGTAATTTGGAAGCAATTTTTAGTAATGCTATCAAGAAGGTTGTTGATTTAGGAGGCTACAGTCAAGAAACAGCTGAAATGGCCGTTTCAAGGAAGTCCTTATACACAGAAGGAGACCCTCTCACAAATATTGTTTACAACACACTGAATACTTTGAAAGGGAAAGGTACTGAAACTACTGCAGAATTTGTATTTCAAAATACAAAGCAGTTACTGCATTATAGTTTGGTAGAGATGCTAGGTGTACTTCGGGAACTAAAACCCTCCTTAACAGTAACTGAAGCAATGTGGGAGTTGCTGGTACATGACTTAAGTATTACACGAGTCATTGCACCAGAAGGTCAACTGAGTGGTGGTGATTCTAGCGAGCAAAGCTCTGACAAGTCTTCTGCTCCCCCATCAAAGTTAAATGTTCAGTCTGATATGATTGGAAGTATGAGTGTGACAACTTTCACAAATATCTCCCAGGAAAGTAAATCAGAATCTAATTCTCAGCTGATGAGGAGCAGAAAACACCATAAAGAGTTTACATCAGTGCTTAGGGAGAAGTTCTTTCATATGAAAGAACCTAAAGCTTGTGGAAAAGCGGGTGTTAAATTAGGAAAGCTTACAAGCGTAAGTGGTTTGATTGTTGAAAAAAAACTCAAGCCACCATCTGAAGTTCCAAATCAGAAAATGAAACGTGGCTCCTCAAATACAAAAGGAGTTAGCATAGCAGGAGTATGCCGTATTTCAACCAGTGATGATTCAGCTTTACCCGAAGGAGGTAGTGCTGCAAAATTATCCACAAAGGATGCAACATCTACTTCTCCAACAGTGAAAACAGCCAAACCAAAACCTAAGCCATTCTCCCCTGCCGCTCAAAAGGTTCAAAATTACTGTGCTGGTATTCCTTTTGATGAGGCTTCGGGCAAATTTGTCCCACGGGATGAGAAGGACGAACAAGTTTTGAAATTAGTAGCTCGAGCACAAGAATTGCAGGATGAGGTGCAAAGCTGGAATGACTGGGCCAATAAGAAGGTTATGCAGGTAGCAGATAAGCTTCGCAAGCTTCAGGTGGAGTCTAAATCGTTGAAAAAAGAAACTGAAATTTATAGAAAAGAAAGAAAATCTTTAGAAGAGAATGCTGAGAAGAGGATCTCTGAAGTGGAGAATGCCATGGAAAATAATCAAAAGCAACTTGAGAGTGCCACTTCTTCCATACTCATTCTGGAGGCAAAGAAGTCCTTGCTAGAGAAAGAGTTGGTGTCTGCTAAGTCGTTGGCTGAAAAGTCAATGTCAAGTTATCAACAAGCACTGGAGAGAGAGCAGATGACTATTCAACAAGCCCAGTCGTGGAAAACAGAGTTGGATTTGCTTCAAGATGAACTTGAGAAAGAGAAGCAAAAGTTAGCTAACTTGCACCAGGAGATAGAAAAGGGGAAAAATCTTCTAGTCAATACTGAGGGTAGAGTGAAAAAGGAGAGAGCCAAGACAGAAAAAATCCTCGCACAGGCGGCATACTTTAGAAAAGAAAGAGAACAGTCTGAAGCACTCATGAAAGCTGAGGAGGATGCCGTCAGAAAGAAGGCAGCTAGTCAACTGCAGGAATATGTGGACAGCATGGTAAAGCTAGAGAAGGAGATCGCTGTGCTAAGACTAAAATCTGGTTCCAAAATAAGTACTCCATCCTTGGTGAAAGAAAACAAGAAATCTGAGACTGTGATGACAAGGGGCTCCCAAGACAAACCAGCTGGTGGAAGATTGAAGCGGGAGCATGAGTGTGTCATGTGCCTATCAGAGGAGAGGTCGGTTGTTTTTCTGCCATGCGCGCATCAGGTTTTGTGTCCGAATTGCAATGAGCTCCATGAGAAGCAAGGGATGAAGGAATGCCCTTCATGTAGGACCACCATCGAATTTAGGATTCATGCCAAATTTCTTGGGCAGCAGTAG 2226 0.4182 MEVIDKGIIVAEEMDKTVGSEQGCNYKRKLDDESSSMVTEDGSLSMEDDFPPYEFTNPQSFDSAEFGLGCCTEEQQLGVLEVEDWKDPMATQLEDLLMSNLEAIFSNAIKKVVDLGGYSQETAEMAVSRKSLYTEGDPLTNIVYNTLNTLKGKGTETTAEFVFQNTKQLLHYSLVEMLGVLRELKPSLTVTEAMWELLVHDLSITRVIAPEGQLSGGDSSEQSSDKSSAPPSKLNVQSDMIGSMSVTTFTNISQESKSESNSQLMRSRKHHKEFTSVLREKFFHMKEPKACGKAGVKLGKLTSVSGLIVEKKLKPPSEVPNQKMKRGSSNTKGVSIAGVCRISTSDDSALPEGGSAAKLSTKDATSTSPTVKTAKPKPKPFSPAAQKVQNYCAGIPFDEASGKFVPRDEKDEQVLKLVARAQELQDEVQSWNDWANKKVMQVADKLRKLQVESKSLKKETEIYRKERKSLEENAEKRISEVENAMENNQKQLESATSSILILEAKKSLLEKELVSAKSLAEKSMSSYQQALEREQMTIQQAQSWKTELDLLQDELEKEKQKLANLHQEIEKGKNLLVNTEGRVKKERAKTEKILAQAAYFRKEREQSEALMKAEEDAVRKKAASQLQEYVDSMVKLEKEIAVLRLKSGSKISTPSLVKENKKSETVMTRGSQDKPAGGRLKREHECVMCLSEERSVVFLPCAHQVLCPNCNELHEKQGMKECPSCRTTIEFRIHAKFLGQQ 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03739 741 MobiDBLite consensus disorder prediction 656 677 - -
Mepo4g03739 741 SUPERFAMILY RING/U-box 682 732 - -
Mepo4g03739 741 MobiDBLite consensus disorder prediction 359 373 - -
Mepo4g03739 741 Coils Coil 619 646 - -
Mepo4g03739 741 MobiDBLite consensus disorder prediction 215 237 - -
Mepo4g03739 741 Pfam Family of unknown function (DUF6592) 100 206 IPR046527 -
Mepo4g03739 741 Coils Coil 407 427 - -
Mepo4g03739 741 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 660 735 IPR013083 -
Mepo4g03739 741 MobiDBLite consensus disorder prediction 251 271 - -
Mepo4g03739 741 MobiDBLite consensus disorder prediction 213 237 - -
Mepo4g03739 741 MobiDBLite consensus disorder prediction 347 384 - -
Mepo4g03739 741 Coils Coil 439 512 - -
Mepo4g03739 741 PANTHER OS05G0141500 PROTEIN 20 735 IPR046934 -
Mepo4g03739 741 Pfam Zinc finger, C3HC4 type (RING finger) 683 730 - -
Mepo4g03739 741 Coils Coil 541 582 - -
Mepo4g03739 741 CDD RING-HC_MIP1-like 681 733 - -
Mepo4g03739 741 ProSiteProfiles Zinc finger RING-type profile. 686 726 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03739 Mepo-Chr4 46856057 46861269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03739 686 733 C3H Transcription Factor Family AT1G73950 50.000 7.33e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03739 - - cam:101504588 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03739 4 46856057 46861269 Mepo4g03739 4 46856057 46861269 ECH