Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03735 ATGAAGGAAAAAGTGGATTCACCTATTACAGTTCTTGAAGACTATTTCAGAAGTTCAGATTCAGAATCAAGTTCTTCCAAAGAACCTACTTTGGATTCTGAGTCTCATCATGATGACATTTCAAAACCTGTTTCAAGGTGGCATTCATTTCTTCAATTGTTGAAAACCAGATCAAAGAAACAGTTACCTGCTGCATTGAATCATCCTCTTAATGGACAATTCTCAAGAAGAATGAGCAGAAGCATGAGGGAAACCATTCTTCCAAGTTGTCTCACTCTTGCAAATGCAACTTCAACACCTTGTAGATCACCATGGAAAATCTTTTCTCATCATGATATACAAGTTGCAACCAATAATTTTAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCTGAAGTTTACAAAGGTTGTTTGCCTAATCATCGATTAGTAGCAATCAAACGGTTAACTAGAGGAACTCCTGATGAAATTATAGGAGACTTTTTATCCGAACTTGGTGTAATGGCGCATGTAAACCATCCGAATACTGCTAAGCTTGTAGGCTATGGAGTGGATGGAGGAATGTATCTAGTTCTTGAGTTGTCCGAAAAAGGGAGTCTAGCTTCAGTGCTATATGGTTCCAAGGAGAAAGTACCATGGTGTATTAGGCAAAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAAAAGATTTATCCACAGAGATATAAAAGCTGCAAATATCTTGCTCACAGAGGACTTTGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTGCCAGAGAATTGGACTCACCATAACGTTTCAAAATTTGAAGGAACTTTTGGCTACCTTGCTCCTGAGTACTTGCTTCATGGCATAGTAGATGAGAAAACAGATGTATTTGCATTTGGTGTATTGCTATTAGAATTAATCAGTGGGAGAAGAGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGTTGAAAAAGAATGATATAATGCAGCTAGTAGATCCTTCACTAGCAGGTGAATTTGACTTTAGGCAGATGAATCTTATGCTCTTGACAGCTTCTTTATGCATACAACAGTCCTCCATTCGCCGTCCCTCTATGAGACAGGTTGTGCAGCTTCTGAACGGAAACCTTAGTTGCTTCAAGGCCATGAAGAAATCTCGATTGCCATTCTTCCGAAAAGTATTTCAGGAAGAGCTCCTTGATTCTGATTAG 1248 0.3854 MKEKVDSPITVLEDYFRSSDSESSSSKEPTLDSESHHDDISKPVSRWHSFLQLLKTRSKKQLPAALNHPLNGQFSRRMSRSMRETILPSCLTLANATSTPCRSPWKIFSHHDIQVATNNFSQENLIGKGGYAEVYKGCLPNHRLVAIKRLTRGTPDEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKVPWCIRQKIALGTAKGILYLHEGCQKRFIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHNVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELISGRRALDYSQQSLVLWAKPLLKKNDIMQLVDPSLAGEFDFRQMNLMLLTASLCIQQSSIRRPSMRQVVQLLNGNLSCFKAMKKSRLPFFRKVFQEELLDSD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03735 415 SMART serkin_6 120 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03735 415 ProSiteProfiles Protein kinase domain profile. 120 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03735 415 MobiDBLite consensus disorder prediction 27 41 - -
Mepo4g03735 415 MobiDBLite consensus disorder prediction 15 41 - -
Mepo4g03735 415 PANTHER OS08G0249100 PROTEIN 6 413 IPR046958 -
Mepo4g03735 415 Pfam Protein kinase domain 121 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03735 415 Gene3D Transferase(Phosphotransferase) domain 1 197 400 - -
Mepo4g03735 415 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 91 194 - -
Mepo4g03735 415 Gene3D Phosphorylase Kinase; domain 1 94 194 - -
Mepo4g03735 415 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 197 399 - -
Mepo4g03735 415 SUPERFAMILY Protein kinase-like (PK-like) 99 385 IPR011009 -
Mepo4g03735 415 ProSitePatterns Protein kinases ATP-binding region signature. 126 148 IPR017441 GO:0005524
Mepo4g03735 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03735 Mepo-Chr4 46817056 46819998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03735 108 387 Receptor kinase-like Gene Family AT1G53420 40.972 3.06e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo4g03735 Pkinase 7.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03735 - - gmx:100780587 702.59