Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03726 ATGGGTGATGATGAAAAGGTTCATATTAACATCGTATTTATTGGTCATGTCGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGCGGTATTAAAAAGGATGTCATCGAGAGATTTGAGAAAGAAGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAGCTTGAAAGAGGTGTCACAATTGATATTTCCATGTCCAAGTTTGAGACAACCAAATACCACTGCACTCTCATTGATGCCCCCGGACACAGAGATTTCATCAAGAACATGTTAACCGGCACGTCCCTAGCTGACTGTGCTGTTCTCATCATTGATTCCGCAACTGGTGGTTTTGAGACTGGTTTTTCTACGGGTGGTCAGACCAGTGAACATGCTCTTCTTGCCTATGCTCTTGGTGTGAATCAAATTATCTGCTGCTGCAACAAGATGGATGCAACTACACCCAAATACTCTAAGGGTAGGTATGAAGAAATTGTGACGAATTTCTCTCCCTTTTTGAGGAAGGTTGGCTATAACCTATCTGACATTCCATTTGTTCCCATATCTGGTTTTGACGGAGAGAACATCATTGAGCGCTCTACTAACCTTGACTGGTACAAAGGTCCCACCCTTTTTGAAGCTATAGACCAAATCAAAGAACCGAAGAGGCCATCAGATAAGCCTCTCCGATTACCAATCCAGTCTGTTTACATGATTGGAGGAATTGGAGTCGTGCCTGTTGGTCGTGTTATGACTGGTGTCTTGAAACCAGGAATGGCGGTGACTTTTGCCCCAACTGGGGTGCAAACTGAAGTGAGGTCTGTGGAGATGCACCACGAAGGTCTCATCGAGGCCCTTCCTGGTGACATTGTGGGATTCAATGTTCAGAACATGTCTGTTAAGGATCTCAAGCAAGGCTATGTTGCCTCAAACTCCAACGATGATCCCGCCATGGAAGCCGTTAAATTTACTTCTCATGTTATTGTCTTTAATCACCCTGATGGCAAAATTCCACTTGGCTATACACCTGTTGTTGACTGCCACACCTCCCACATTCCTGTCAGGTTCGATAGGTTTGTTAACAAGTTTGACAGGCGTTGTAATTTTGTGCTTGAGCAGGAGCCCAAATTCTTGGAGAATGGTGATGGGGGGTTGTTGAAATGA 1182 0.4475 MGDDEKVHINIVFIGHVDSGKSTTAGHLIYKLGGIKKDVIERFEKEAAEMNKRSFKYAWVLDKLKAELERGVTIDISMSKFETTKYHCTLIDAPGHRDFIKNMLTGTSLADCAVLIIDSATGGFETGFSTGGQTSEHALLAYALGVNQIICCCNKMDATTPKYSKGRYEEIVTNFSPFLRKVGYNLSDIPFVPISGFDGENIIERSTNLDWYKGPTLFEAIDQIKEPKRPSDKPLRLPIQSVYMIGGIGVVPVGRVMTGVLKPGMAVTFAPTGVQTEVRSVEMHHEGLIEALPGDIVGFNVQNMSVKDLKQGYVASNSNDDPAMEAVKFTSHVIVFNHPDGKIPLGYTPVVDCHTSHIPVRFDRFVNKFDRRCNFVLEQEPKFLENGDGGLLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03726 393 PRINTS GTP-binding elongation factor signature 10 23 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 PRINTS GTP-binding elongation factor signature 149 158 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 PRINTS GTP-binding elongation factor signature 89 99 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 PRINTS GTP-binding elongation factor signature 69 77 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 PRINTS GTP-binding elongation factor signature 105 116 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 Gene3D - 3 227 IPR027417 -
Mepo4g03726 393 Gene3D Translation factors 230 317 - -
Mepo4g03726 393 FunFam Elongation factor 1-alpha 230 317 - -
Mepo4g03726 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 249 IPR027417 -
Mepo4g03726 393 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 6 231 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 Pfam Elongation factor Tu domain 2 249 314 IPR004161 GO:0005525
Mepo4g03726 393 PANTHER TRANSLATION FACTOR 5 391 - -
Mepo4g03726 393 CDD EF1_alpha 10 228 - -
Mepo4g03726 393 CDD EF1_alpha_II 231 321 - -
Mepo4g03726 393 SUPERFAMILY Translation proteins 232 361 IPR009000 -
Mepo4g03726 393 Pfam Elongation factor Tu C-terminal domain 325 388 IPR004160 -
Mepo4g03726 393 Pfam Elongation factor Tu GTP binding domain 7 223 IPR000795 GO:0003924|GO:0005525
Mepo4g03726 393 FunFam Elongation factor 1-alpha 1 227 - -
Mepo4g03726 393 Gene3D Translation factors 324 393 - -
Mepo4g03726 393 NCBIfam translation elongation factor EF-1 subunit alpha 4 393 IPR004539 GO:0003746|GO:0005525|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03726 Mepo-Chr4 46716382 46717652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03726 5 393 Eukaryotic Initiation Factors Gene Family AT5G60390 76.350 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03726 K03231 - csav:115722409 605.52