Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03701 ATGGGTGATAACAACAAAGGGAAACTAGTCTCTGATAGAGAAGTCTTTAAGTACAACACCAATTTCACATCTCATGAGCAAGATCATGAAGTAATCAAAGAGCAAGATCGTTTGCTTCCAATAGCTAATGTTGGCCGGATCATGAAACAAATCTTGCCACCAAATGCAAAAATCTCCAAAGATGCTAAAGAAACCATGCAAGAGTGTGTCTCAGAGTTTGTTAGTTTTGTAACTGGTGAAGCATCTGACAAGTGTCACAAGGAGAAGCGCAAGACAGTGAATGGTGATGATGTTTGTTGGGCTTTGGGGACACTAGGGTTTGATGATTACGCTCAGCCACTCCAAAGGTATTTGTATAAGTATAGGGAATTGGATGCGGAAAGAGGGAACCAAAATAAGGGTAACAACAACATCAACAACAGTGATGAAATTGAAAACAACATTAATGAAACATATGATTATGATGATGGTAAGTCACAAACTCCAAGGAAAGTGAATGTTGCTTCCTCTTCTATGTTCAATAATAGGAACAGTGACCCTCAGTCAAGGGGATTTTAA 558 0.3889 MGDNNKGKLVSDREVFKYNTNFTSHEQDHEVIKEQDRLLPIANVGRIMKQILPPNAKISKDAKETMQECVSEFVSFVTGEASDKCHKEKRKTVNGDDVCWALGTLGFDDYAQPLQRYLYKYRELDAERGNQNKGNNNINNSDEIENNINETYDYDDGKSQTPRKVNVASSSMFNNRNSDPQSRGF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03701 185 SUPERFAMILY Histone-fold 35 154 IPR009072 GO:0046982
Mepo4g03701 185 MobiDBLite consensus disorder prediction 128 185 - -
Mepo4g03701 185 Gene3D Histone, subunit A 25 162 IPR009072 GO:0046982
Mepo4g03701 185 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 102 IPR003958 -
Mepo4g03701 185 MobiDBLite consensus disorder prediction 130 147 - -
Mepo4g03701 185 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo4g03701 185 FunFam Nuclear transcription factor Y subunit B-3 27 151 - -
Mepo4g03701 185 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Mepo4g03701 185 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Mepo4g03701 185 PRINTS CCAAT-binding transcription factor subunit A signature 104 122 - -
Mepo4g03701 185 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03701 Mepo-Chr4 46418328 46419076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03701 31 132 CCAAT-HAP3 Transcription Factor Family AT2G47810 76.471 2.69e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo4g03701 CBFD_NFYB_HMF 3.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03701 K08065 - gmx:100817274 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03701 4 46418328 46419076 Mepo4g03701 4 46418328 46419076 ECH