LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g03692	ATGGTTGAAACCAGACGTGGTTCTTCTTCTTCCAAACGCCCTCTATCTTCTCCTCCTCCTCCTTCCAATACCAAACGATCCAAGGTTTCTCAAGATGCTTCATCAACCACTTTGCCTTCAATTCCGGTCAAAGAATCTGCACAAAGAAACGAATCTGGTAAACCTGATAATAATATTCAACAACCATCTGATCTACCAGAAACTGCTTCTTTCAACGTTCTTGATGGTGGTAATAATGAGAAATCTCATTCTAACCCAATCCAACCTAACCCTTTGTCTCCTCAGTCTCCAGGTGAATCTGCTGAGAAACCAAAAGTGGCTGCCCCGGTGGTTTCTTCTCGGCGAAAACCACGTTCTGTGGCGAAATTGATAGCTAAGCCTGCTGCTTGGGGAAAGCTTATATCTCAAAGCACTCAGAATCCTCACTTGTCCTTAAGTGATCCAATCTTCACCGTTGGACAAGGTCGTCAGAGTAATTTGGTGCTTAAAGATCCTACCATTGGTAATGTTCTGTGCAAGTTGAGCCACATAGAGCAGCAACAGGGAGGTTCATCAGTTGCCCTACTGGAAATCACAGGGGGTAAAGGTGTTGTGCAAGTCAACGGCAAGACTTACCGAAGGAATCACAAAATGATTTTAAATGGAGGTGATGAGGTGATATTTGGTGCTTCTGGAAAGCATGCTTATATCTTTCAGCAGCTCAAAAGTAACAATGTTTCTACTGCTGGTACACCTTCTGTGAGTATTTTAGAAGCCCAGAGTGCTGCATTGAATGGGATGCAAGTTGAAGCTAGATCTGGAGACCCTTCGGCTGTTACAGGTGCATCAATATTGGCCTCTCTATCTAATATTCGCAAAGATTTATCTCTCATTTCACCTCCAGCTAAAACATGCAAGAAACAAAGTGCTGATATTTCATCACTACCTTCTGGCCATGGGGATAATGCTCCGGACAATGAAATGAAAGATACCACCAATAATGATGAATCAGCTGGAGTTTTTTCTTCTGGTAAAGATGTTCCTTCATCCTCCACCACGGTTAATGAAAACCCTAGCCTTGACACCATGGATGTTGATACCAACGCGGACACAGATGTTGGGAAGATGACCGCTGGCAATTACGAATTGAGGCCGTTGCTGTGCATGCTTACCGGCTCAGGAACTGAATTTGATTTAAGTGGCAGCATTCACAAGATGCTAGAAGATCAAAGGGAATCAAGAGAACTTGATACACCAACAATATTAGCATCCACCAGGCGACAAGCATTTAGGGACAGTTTAGAACAGAGAATTCTCAAAGCTGATGATATTGATGTCTCTTTTGAAACTTTCCCATATTACCTAAGTGATACAACAAAGAACGTGTTGGTAGCTTCTACATATATTCATTTGAAGTGCAATGGTATCGGAAAATATGCTTCAGATTTCTCATCATTGTGCCCACGGATATTGTTATCTGGTCCTTCAGGTTCAGAAATATATCAGGAGACTTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCCAGTTTACTGATTGTGGATTCACTTTCGCTGCCCGGGGGAACACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCAAAGCCTGAAAGGCCAGCTGTTTTGTCCAAGAGAAGTGGCCAGGCTTCTATTTTACATCATAAGAAACCCACTTCTAGTGTTGATGCTGAAATTATTGGTGGATCTACATTAAGTTCGCAAGCTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCACTGCTCTTAAAAAAGGTGACCGGGTAAAATTTGTCGGTAACTTTCCACCTACTGTTTCGTCACTGCAAAATTATGCTTCAAGTTCAAGGGGACCAAGCTATGGCTTCCGGGGCAAAGTTGTACTTGCTTTTGAAGACAACGAGTCTTCAAAAATTGGGGTCAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCATATCGAAGATGACCATGGTTTCTTTTGTTCCGCAAACCATTTACAACGGATAGAGAGTGCAGGAGGGGATGACGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGCTTCTAATCAAAGTAAAAGTGGTGCACTTGTGTTGTTCATTAAAGATATAGAGAAGGCAATGGCTGGGAACACAGATGTTTTGAAAAGTAAATTTGAAACCCTGCCACAGAATATTGTGGTAATCGGCTCAAATACTCAGCTGGACAGTCGTAAGGAGAAGACCCATCCTGGGGGCCTTCTGTTTACAAAGTTTGGGAGCAATCAGACCGCTCTACTTGATCTTGCTTTTCCGGATAACTTTAGTAAACTACATGATAGAAGCAAAGAAAGCTCCAAATTAACAAAGCAGCTCAACCGCCTTTTCCCAAACAAAGTGACAATACAAGGGCCTCAGGATGAAGCTTTACTTCCGGACTGGAAGCAGCAGTTAGATCGTGACATTGAAACTATGAAAGCACATTCCAATATTGTCTTGCTTCGTTCGGTCCTCAAAAGAACAGGATGGGATTGCTCTGACCTTGAGACAATTTGCATCAAAGATCAAACCCTAACTACTGAAAATGTGGAGAAGATCATTGGCTGGGCCGTAAGTTATCATTTTATGCAATCACATGAAGCTTCTACCGAAGAAGGAAAGCCCGCGATATCTGCAGAAAGCATTAAGTATGGGTTTGACATTTTTCAAAGCATCCAAAATGAGAACAAGAACGTAAAGAAGTCACTGAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAGTTGCTTGGTGATGTTATTCCGCCAACTGAAATTGGGGTCACATTTGAAGATATTGGAGCTTTAGAAAATGTGAAGGATACCTTGAAGGAATTGGTCATGCTTCCTCTTAAAAGGCCTGAACTGTTTTGTAAAGGACAACTAACTAAGCCTTGCAAGGGAATATTGCTTTTCGGTCCCCCTGGCACGGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTCATCAACATTTCAATGTCCAGCATTACTTCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTCTCCCTAGCCAGCAAAATTGCTCCAAGTGTTATATTTGTTGATGAGGTTGATAGTATGTTAGGGAGACGTGAAAACCCTGGTGAGCATGAGGCCATGCGTAAAATGAAGAATGAGTTTATGGTCAATTGGGATGGTCTGCGTACCAAAGAAAAAGAGCGTATACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCAAGGAGATTGATGGTTGATTTGCCAGATGCTCCGAATAGAGGAAAAATTTTGAGAGTCATTTTAGCGAAAGAAGATTTGGAAGCCGATGTTGACTTGGATGCAATAGCAAATATGACGGATGGATACTCAGGAAGTGACCTAAAGAATTTGTGTGTCACAGCAGCTCACTGCCCAATAAGGGAGATCTTGGAGAAGGAAAAGAAGGAGAGAACCTCGGCATTGGCTGCGAACAAGCCTTTACCTGGATTGTGTAGCAGTGCCGACATTCGTCCCTTAAAGATGGAAGATTTTAAATATGCACACGAGCAGGTGTGTGCAAGCGTGTCCTCAGATTCAACAAATATGACCGAACTACTCCAATGGAATGACCTCTATGGAGAAGGTGGATCGAGAAAAAAGACATCTTTGAGCTATTTCATGTAA	3735	0.422	MVETRRGSSSSKRPLSSPPPPSNTKRSKVSQDASSTTLPSIPVKESAQRNESGKPDNNIQQPSDLPETASFNVLDGGNNEKSHSNPIQPNPLSPQSPGESAEKPKVAAPVVSSRRKPRSVAKLIAKPAAWGKLISQSTQNPHLSLSDPIFTVGQGRQSNLVLKDPTIGNVLCKLSHIEQQQGGSSVALLEITGGKGVVQVNGKTYRRNHKMILNGGDEVIFGASGKHAYIFQQLKSNNVSTAGTPSVSILEAQSAALNGMQVEARSGDPSAVTGASILASLSNIRKDLSLISPPAKTCKKQSADISSLPSGHGDNAPDNEMKDTTNNDESAGVFSSGKDVPSSSTTVNENPSLDTMDVDTNADTDVGKMTAGNYELRPLLCMLTGSGTEFDLSGSIHKMLEDQRESRELDTPTILASTRRQAFRDSLEQRILKADDIDVSFETFPYYLSDTTKNVLVASTYIHLKCNGIGKYASDFSSLCPRILLSGPSGSEIYQETLSKALAKHFGASLLIVDSLSLPGGTPSKEVDSAKESSKPERPAVLSKRSGQASILHHKKPTSSVDAEIIGGSTLSSQAMLKQEVSTASSKGTALKKGDRVKFVGNFPPTVSSLQNYASSSRGPSYGFRGKVVLAFEDNESSKIGVRFDKSIPDGNDLGGHIEDDHGFFCSANHLQRIESAGGDDDKVAINEIFEVASNQSKSGALVLFIKDIEKAMAGNTDVLKSKFETLPQNIVVIGSNTQLDSRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSKLHDRSKESSKLTKQLNRLFPNKVTIQGPQDEALLPDWKQQLDRDIETMKAHSNIVLLRSVLKRTGWDCSDLETICIKDQTLTTENVEKIIGWAVSYHFMQSHEASTEEGKPAISAESIKYGFDIFQSIQNENKNVKKSLKDVVTENEFEKKLLGDVIPPTEIGVTFEDIGALENVKDTLKELVMLPLKRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKEKERILVLAATNRPFDLDEAVIRRLPRRLMVDLPDAPNRGKILRVILAKEDLEADVDLDAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERTSALAANKPLPGLCSSADIRPLKMEDFKYAHEQVCASVSSDSTNMTELLQWNDLYGEGGSRKKTSLSYFM	1244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	295	361	-	-
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	326	359	-	-
	Mepo4g03692	1244	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	939	1219	IPR027417	-
	Mepo4g03692	1244	SMART	AAA_5	976	1113	IPR003593	GO:0016887
	Mepo4g03692	1244	Pfam	ATPase family associated with various cellular activities (AAA)	980	1109	IPR003959	GO:0005524\|GO:0016887
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	523	554	-	-
	Mepo4g03692	1244	Gene3D	-	1112	1206	-	-
	Mepo4g03692	1244	Gene3D	-	129	242	-	-
	Mepo4g03692	1244	Gene3D	-	938	1218	IPR027417	-
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	295	313	-	-
	Mepo4g03692	1244	FunFam	p-loop nucleoside triphosphate hydrolase superfamily protein	938	1113	-	-
	Mepo4g03692	1244	ProSitePatterns	AAA-protein family signature.	1083	1102	IPR003960	GO:0005524\|GO:0016887
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	22	97	-	-
	Mepo4g03692	1244	Pfam	AAA+ lid domain	1133	1168	IPR041569	-
	Mepo4g03692	1244	PANTHER	AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED	421	1243	-	-
	Mepo4g03692	1244	SUPERFAMILY	SMAD/FHA domain	129	225	IPR008984	GO:0005515
	Mepo4g03692	1244	MobiDBLite	consensus disorder prediction	1	119	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g03692	Mepo-Chr4	46316154	46345384	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g03692	975	1184	Calmodulin-binding Proteins	AT3G56690	35.047	7.13e-30	126

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g03692	-		-	gmx:100801477	1843.17