Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03682 ATGGTCAGAAGAATATCACACCTTACCTTTCTGCTTGCATTTATTTTTATTCCATACCTTGCAAGCCAGTTGGTATGTGCAAAAGGGAAAGACAATGTTAAAGAAGCTTGCACAGTAACTAGGTATCAAAACCTTTGTATGCGCTCGCTAGCACCATTCTCTAACAGTGCTGGAAGAAGCCCTAGCAAGTGGGCAAGGGCTGGAGTGTCAGTGACAATCGGTGAGGTTAAGAATGTCCAAGCATATCTCGCAAACTTAACTAGACACGGGCGTTTAAGAGCAAGAAATAAACTTGCATTATTAGATTGTATCGAGACTATTGCAGACGCCCTTGACGAGCTTCATAGATCACTGAATGTGCTCAGAAGGCTTAGTAGAAGGACATTTGGTACCCAGATGGGGGACCTTAATACATGGATAAGTTCAGCACTCACAGATCAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAAAGTTATGAAAATTCAATTGCTGCAAAAGAGGGTTCTCAAATCCTATTATACAACCAGTAACGCTCTAGCTCTTGTCAATAAACTTGCCACTACAGGTCTAGGAAGCATTTCTGATCCATAG 594 0.4175 MVRRISHLTFLLAFIFIPYLASQLVCAKGKDNVKEACTVTRYQNLCMRSLAPFSNSAGRSPSKWARAGVSVTIGEVKNVQAYLANLTRHGRLRARNKLALLDCIETIADALDELHRSLNVLRRLSRRTFGTQMGDLNTWISSALTDQDTCLDGFQGKKVMKIQLLQKRVLKSYYTTSNALALVNKLATTGLGSISDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03682 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 188 IPR035513 -
Mepo4g03682 197 FunFam Pectinesterase inhibitor 3 28 187 - -
Mepo4g03682 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Mepo4g03682 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Mepo4g03682 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Mepo4g03682 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
Mepo4g03682 197 CDD PMEI-like_3 36 188 - -
Mepo4g03682 197 NCBIfam pectinesterase inhibitor domain 1 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03682 Mepo-Chr4 46165783 46166842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03682 33 194 Carbohydrate Esterase AT3G14310 32.934 3.93e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03682 - - gmx:100791264 232.261