Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03678 ATGAGCGGAGTGAAGGGTAAGAAGAAGGGAACAAGCTTCGTGATCGATTGCGCGAAGCCAGTTGAGGATAAGATTATGGATATCGCTTCCCTGGAGAAGTTTCTTCAGGAAAGGATTAAGGTTGGAGGTAAAGCCGGTGCTCTCGGTGATTCCGTTACTGTTACTCGTGACAAATCTAAGATCACTGTTACCTCTGACAGCAATTTCTCCAAAAGGTATTTGAAGTACTTGACCAAGAAGTATTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTTATTGCATCCAACAAGGACCGCAATATCTATGAGTTGAGATACTTCAACATCGCTGAGAATGAGGGTGAAGAGGAAGACTAA 360 0.4333 MSGVKGKKKGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03678 119 Gene3D - 2 119 IPR038526 -
Mepo4g03678 119 PANTHER 60S RIBOSOMAL PROTEIN L22 5 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mepo4g03678 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Mepo4g03678 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03678 Mepo-Chr4 46123868 46125428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03678 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.793 2.80e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03678 K02891 - gmx:100500073 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03678 4 46123868 46125428 Mepo4g03678 4 46123868 46125428 ECH
Mepo4g03426 4 43749031 43751235 Mepo4g03678 4 46123868 46125428 ECH