Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03660 ATGTGTGGTGGTGCTATCATCGCTGACTTCATTCCTCGCCGTGACGGCCGCCGTCTCACCGCCTCGGAGCTCTGGCCTAACTCATTTGGCCAACAGATTGACTCCTCAAACTTCGGTTTTTCTCATACTGCTGCTGATCAACAACCACCCAGCACTCTCAAAAGATCACAACCTCCCAAAGTTAGTGAACGAGCTGAGAAGCCACTGAAAAAACAGAGGAAGAATCTCTACAGAGGGATTCGACAGCGTCCATGGGGAAAATGGGCTGCAGAGATTCGTGATCCAAGAAAAGGAGTTCGTGTTTGGCTTGGTACATTCAACACTGCAGAAGAAGCTGCTAGAGCTTATGACAAAGAAGCTCGAAAAATCCGTGGCAAAAAAGCTAAGGTTAATTTTCCTAACGAAGATGATGAATATACCATTCATGCTACTCGTCGTTACAATAATAATCCTCCACCGATTCGACCACAGAAGCTTCCTCTTTATCATCAACAACACTATCAGAAGAATCTGAACTTGGAATTTGGTTATGATCTGAACCAAACTGACACAATTCAAAATTCTCATGTTATCAATACTGAACCTTTTAACATATCTGGTTCTGGTGGTGATGAGAATTCTTTATTTGGGTCTGGTTCAGTTTCAGAGGTTGGTTTTTCTGTGATGGAGTTCAATGGTAGTTCCAATCAGCATGAATTTGGTTATTTTGGTGGTGTTGTGAATGAACATGAGAAAGAGAAAGAGAAAGTGGCAGAACAAAAAGAGCAAGAAACACATGTTGTTGAACAAGCTGAAGCTGAATTAGCAAAAAATGAGGTACAAGAATTGTCAGATGAATTGTTGGCATACGAGGATTACATGAAGTTTTATCAGATTTACTATGATGGACAATCAGTGATGCCACCTAATAATGTTCAGGAACATGTTGTTGGAGATTTATGGAGCTTTGATTGA 954 0.4119 MCGGAIIADFIPRRDGRRLTASELWPNSFGQQIDSSNFGFSHTAADQQPPSTLKRSQPPKVSERAEKPLKKQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEDDEYTIHATRRYNNNPPPIRPQKLPLYHQQHYQKNLNLEFGYDLNQTDTIQNSHVINTEPFNISGSGGDENSLFGSGSVSEVGFSVMEFNGSSNQHEFGYFGGVVNEHEKEKEKVAEQKEQETHVVEQAEAELAKNEVQELSDELLAYEDYMKFYQIYYDGQSVMPPNNVQEHVVGDLWSFD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03660 317 Coils Coil 240 286 - -
Mepo4g03660 317 CDD AP2 77 134 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 MobiDBLite consensus disorder prediction 36 58 - -
Mepo4g03660 317 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Mepo4g03660 317 FunFam Ethylene-responsive transcription factor 2 75 134 - -
Mepo4g03660 317 Pfam AP2 domain 77 125 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
Mepo4g03660 317 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Mepo4g03660 317 PANTHER DNA-BINDING DOMAIN 56 273 IPR044808 GO:0003700|GO:0009873
Mepo4g03660 317 MobiDBLite consensus disorder prediction 36 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03660 Mepo-Chr4 45904517 45906162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03660 1 134 AP2-EREBP Transcription Factor Family AT3G16770 54.610 6.95e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g03660 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03660 K09286 - gmx:100819416 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03660 4 45904517 45906162 Mepo4g03660 4 45904517 45906162 ECH