Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03639 ATGGGAAGAACTCCTTGTTGTGCGAAAGTAGGGTTGAAAAGAGGAAGATGGACAACAGAAGAAGATGAGATCTTGTCAAAATACATTCAAGCCAATGGAGAAGGTTCTTGGAGGTCATTGCCAAAGAATGCAGGATTATTAAGGTGTGGGAAGAGTTGTAGACTAAGATGGATTAACTATCTGAGAACTGACCTCAAAAGAGGAAACATTTCTGCTCAAGAGGAAGATACCATTGTGAAGCTCCACACTACTTATGGTAACAGGTGGTCCATGATTGCTAGCCACTTGCCAGGAAGAACGGACAATGAAATTAAAAACCACTGGAATTCTCACCTCAGCAGAAAAATCTACAGTTTCTCAAAAATTTCCACAACTATAGAGCCAAAAATCATGGATGTTCGACCTCCTAAACGTAAATGTGGTAAAACAAGTCGTTGGGCCATGAAGAAGAACAAAAACTACAAAAAACAAACCGTTATTAATACTAAAGAAAATTATATTGAACCAGAAGTTCAAATTCCACGTACTCCTTCACTGGATTGTGAAGTTACAGAGAAAATAATTGATGACGTGGAGGTAAAAACAACACATGATGAGAAAGAAACAACGTATGAATTATGTGACGACATCTTAGGGCTGAGTGAGTTGTTAGATGACATTAATGAAGACAGTGGGGCATTGTGTATAAGTACTCATGTCAAGACAATGGAAAATTGTTTGCTGGAAACAAGTGGGTCTGTTTCAAATTTAAGTCAAGAGAGAGACATGGTGGGTGATGGAGGTGAAGAAAATGAAAGAACAACCAATGATGATGGAGACTGTCTTAAATATAATTTGGTTTCATGTGAAGACCCCGAAAGTAGTGTGAATCAAACCTCAAATAACGGGGAAAGTGGAGAATGGTCTTTGAATATGGGTTTGGATTTGGATGATAAATGGAATTGGGAGAGTGTGATGGAATTTAGTGTTGATGATGATAATAGTAATAGGGAGCATAAGGATAATCTTTTGAATTGGTTGTGTGAAGATGATGATTGGGAAGGTGATAGTAAGAGGTTGGGAGAGATAGATTCTCAGAAACAAAATGATTTGATTGCTTGGTTTCTCTCTTAG 1113 0.3783 MGRTPCCAKVGLKRGRWTTEEDEILSKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNISAQEEDTIVKLHTTYGNRWSMIASHLPGRTDNEIKNHWNSHLSRKIYSFSKISTTIEPKIMDVRPPKRKCGKTSRWAMKKNKNYKKQTVINTKENYIEPEVQIPRTPSLDCEVTEKIIDDVEVKTTHDEKETTYELCDDILGLSELLDDINEDSGALCISTHVKTMENCLLETSGSVSNLSQERDMVGDGGEENERTTNDDGDCLKYNLVSCEDPESSVNQTSNNGESGEWSLNMGLDLDDKWNWESVMEFSVDDDNSNREHKDNLLNWLCEDDDWEGDSKRLGEIDSQKQNDLIAWFLS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03639 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo4g03639 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo4g03639 370 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo4g03639 370 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo4g03639 370 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 192 - -
Mepo4g03639 370 CDD SANT 16 61 IPR001005 -
Mepo4g03639 370 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo4g03639 370 SMART sant 66 114 IPR001005 -
Mepo4g03639 370 SMART sant 13 63 IPR001005 -
Mepo4g03639 370 FunFam Myb transcription factor 11 67 - -
Mepo4g03639 370 Gene3D - 14 66 - -
Mepo4g03639 370 Gene3D - 71 116 - -
Mepo4g03639 370 MobiDBLite consensus disorder prediction 256 270 - -
Mepo4g03639 370 CDD SANT 71 112 IPR001005 -
Mepo4g03639 370 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo4g03639 370 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo4g03639 370 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03639 Mepo-Chr4 45739300 45743857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03639 1 370 MYB Transcription Factor Family AT2G47460 40.150 1.78e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g03639 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03639 K09422 - gmx:100814275 342.428