Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03622 ATGAATACTGGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGCATATGGTGCACTAATAGTCCTTGCTTCATTGACACCATGCTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCATCCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGTTCTACCCTTAATTCTACTAATATCACTTTCTCTGATGTTCACACAAAGGTGGCTCCGATATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGACGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAATAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAACAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGATCTCTCTTGGATTTTTGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATTCGTTTGATGATTTTTAATGATAGTGTTTCAATACAAGCTGTTAATGGCAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCAAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGGTGATGATATTTATTGCTATCTTGAGTTTTCTATACCTGAATGTTGGTGTGACAAAGAGAGAAATGCATTTGTGTACATCACTCATAGAACAAAAGGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTCACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGACTGTTAAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAAGAATTTGATTTATCCAATCTTCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACCCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAACTCCAAGACTAACCACAAGAGTGTTATGAAACCTTTGTCTTGGTTGTTTAATAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAGAATTCGGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGAATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACTCTGGAGAAAAAATTAACAATTCGCACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATCTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACCAAATCAGTGATCAAAGTTCACCGGATTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAACAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTTATTAAGCTTCTTCCTGAGTTTGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAATCAAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAATCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAATGTGGAGAATCAAGACATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTGCACATTTCTATCATTGCATTATCAGCTGAAATTGACAAACTGACCACAGAGACTGGAATGGATTTCCACATAACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTACATACATAGAAAATAGTGACATAATGTAA 3318 0.3668 MNTGLSMALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLHPMKSSSTNLSTLLSSTLNSTNITFSDVHTKVAPILFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGISLGFLTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEGAVSCKDQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMVMIFIAILSFLYLNVGVTKREMHLCTSLIEQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSNLLEDVVDLYHPMAMKKGVEVVLDPCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQNSKTNHKSVMKPLSWLFNKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHLSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDQISDQSSPDSSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQTIDQDDIVISKPFHGSRLFQVIKLLPEFGGNWISNSSKPRNESRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEECGESRHPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAITYIENSDIM 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03622 1105 Pfam Response regulator receiver domain 979 1096 IPR001789 GO:0000160
Mepo4g03622 1105 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 381 472 IPR036097 GO:0000155|GO:0007165
Mepo4g03622 1105 SMART REC_2 976 1096 IPR001789 GO:0000160
Mepo4g03622 1105 SMART HisKA_10 394 470 IPR003661 GO:0000155|GO:0007165
Mepo4g03622 1105 PRINTS Bacterial sensor protein C-terminal signature 599 613 IPR004358 GO:0016310|GO:0016772
Mepo4g03622 1105 PRINTS Bacterial sensor protein C-terminal signature 633 651 IPR004358 GO:0016310|GO:0016772
Mepo4g03622 1105 PRINTS Bacterial sensor protein C-terminal signature 617 627 IPR004358 GO:0016310|GO:0016772
Mepo4g03622 1105 MobiDBLite consensus disorder prediction 781 799 - -
Mepo4g03622 1105 Gene3D - 472 680 IPR036890 -
Mepo4g03622 1105 Gene3D - 381 471 - -
Mepo4g03622 1105 MobiDBLite consensus disorder prediction 775 799 - -
Mepo4g03622 1105 SMART HKATPase_4 520 675 IPR003594 -
Mepo4g03622 1105 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 673 IPR003594 -
Mepo4g03622 1105 CDD HisKA 392 466 IPR003661 GO:0000155|GO:0007165
Mepo4g03622 1105 ProSiteProfiles Response regulatory domain profile. 977 1100 IPR001789 GO:0000160
Mepo4g03622 1105 PANTHER TWO-COMPONENT HISTIDINE KINASE 53 1097 - -
Mepo4g03622 1105 CDD REC_hyHK_CKI1_RcsC-like 978 1096 - -
Mepo4g03622 1105 SUPERFAMILY CheY-like 974 1099 IPR011006 -
Mepo4g03622 1105 Pfam His Kinase A (phospho-acceptor) domain 397 470 IPR003661 GO:0000155|GO:0007165
Mepo4g03622 1105 Gene3D - 956 1102 - -
Mepo4g03622 1105 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 459 670 IPR036890 -
Mepo4g03622 1105 ProSiteProfiles Histidine kinase domain profile. 401 675 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03622 Mepo-Chr4 45566978 45572869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03622 11 1101 Histidine Kinase Gene Family AT2G47430 37.892 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g03622 HATPase_c 2e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03622 - - mtr:11417449 1582