Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03617 ATGGCTTCGATTCAACGTCCTGTAAGTTCAGGCTCAGGCTCAGGAGGATCAGACGGTATGGATCTACAAATCGACGAGCGAAAACGCAAAAGAATGCTGTCAAACCGTGAATCTGCGAGACGATCCAGATTGAGGAAGCAGCAACAGGTTGAAGATCTAACCGGAGAAGCCGGTAGATTGCGAAACGAGAACGACCGTCTCGCGCGGAGTATTAAGGCGACGGAGGAAGCGTTTGTGAAGATGGAAGCTGCTAATGATGTTATCAGAGCGCAGACCAAAGAATTGGAGGCTCAGTTTCGGTTTTTGAATTCTGTTATTGATGCTGAAGAGACTAATAGTTTCTCTGTTGATGATGTGCCTTTGATTGATGATCCTCTTCTCAAACCTTGGTTCATACCTTATCCAAATTATTCTATGGCATCACATGAAATGATGCTGCGTTGA 444 0.4527 MASIQRPVSSGSGSGGSDGMDLQIDERKRKRMLSNRESARRSRLRKQQQVEDLTGEAGRLRNENDRLARSIKATEEAFVKMEAANDVIRAQTKELEAQFRFLNSVIDAEETNSFSVDDVPLIDDPLLKPWFIPYPNYSMASHEMMLR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03617 147 CDD bZIP_plant_GBF1 28 78 IPR045314 GO:0003700|GO:0006355
Mepo4g03617 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 82 IPR004827 GO:0003700|GO:0006355
Mepo4g03617 147 MobiDBLite consensus disorder prediction 1 17 - -
Mepo4g03617 147 Gene3D - 25 82 - -
Mepo4g03617 147 FunFam BZIP transcription factor 25 76 - -
Mepo4g03617 147 Coils Coil 43 77 - -
Mepo4g03617 147 Pfam bZIP transcription factor 27 83 IPR004827 GO:0003700|GO:0006355
Mepo4g03617 147 MobiDBLite consensus disorder prediction 1 58 - -
Mepo4g03617 147 MobiDBLite consensus disorder prediction 21 58 - -
Mepo4g03617 147 SUPERFAMILY Leucine zipper domain 27 81 IPR046347 GO:0003700|GO:0006355
Mepo4g03617 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 136 - -
Mepo4g03617 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Mepo4g03617 147 SMART brlzneu 23 87 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03617 Mepo-Chr4 45521336 45522564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03617 25 135 bZIP Transcription Factor Family AT3G62420 45.946 5.23e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g03617 bZIP_1 7.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03617 K25786 - gmx:778144 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03777 3 47271061 47272025 Mepo4g03617 4 45521336 45522564 PCT