Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03607 ATGGGTGGATTTGAAATGGGTCAGTGCATATTGCTGAAAAGAGTGTTTGTGTTATTATTTAGTACAGTGTTTATAGTTGAATGTGGTGCATATGATACAACACTAGAAGCTTCTCATTTATCTATTTCCCCTATGCATGCAATTCCTTCTGTTATGGCTCATCCACCATTGCCCCCTTTTCTTTCCAATTGTTGTGAAAAAGACATGGTGTTGAAACGAGGTAGTGAAGGCTGCCATTGTGTTTATCCTATAAAGTTAGACCTTCTTCTTTTGAATGTCTCGGAAAACCCCGACTGGAATCTTTTTCTTGATGAATTGGCCGCACAATTGGGGATGCGTGCTACACAAATTGAGCTGATAAACTTTTATGTACACAGCTTATTGACTTTGAATATATCAATGTATATCACTCCGCGAAAAGAGATCAGTTTCTCTGCCAAGGAAGCATCTAAAATAAACTCCTCCCTTTTATTTCATAAGGTTCGACTAGACAGTAGATTCGTGGGCGATTACAGGGTTCTCAATTTGACCTGGTTTAGACCTCCAACTCCTTCTAAAGCTCCTACTTTTGCTGCATCAACTGTGAAAACTCCTGAGAGACGAGTACCTACAGCTACATCATCGAGTACATCAGACAGGGGAAGGCATTCAAATTTACTTGTTATCCTTGGAATTATTACTGGGATACTTATCATGTCCATTATCTGTGTACTTATACTTTGTTTATGCACGCTGAGGCCAAAAACAAAAAGACCTGCAGAAACTGAAAAGCCAAGGATAGAACATGCAGTTTCATCTGTTGCATCACATCCCCACCCAACTAGTACACGATTTATTTCTTATGAAGATCTCAGAGAAGCAACAAATAATTTTGAACCAGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTTTTGAATGATGGAACTGCTGTTGCGATTAAGAGGCTTACTAATGGAGGGCAGCAGGGTGACAAAGAGCTTTTGGTTGAGGTTGAGATGCTTAGCCGGCTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGCAATCGTGACTCATCACAAAACCTACTTTGCTACGAGCTTGTCCCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGCTCTCTGGATTGGGACACCAGGATGAAGATTGCACTTGATGCCGCAAGAGGACTTGCTTACCTGCATGAAGATTCACAGCCATGTGTCATACACAGAGATTTCAAGGCATCTAATATATTACTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGTCTAGCTAAACTAGCACCTGAAGGCAGAGTTAATTATCTGTCTACTCGAGTTATGGGCACATTTGGGTATGTAGCACCTGAGTATGCTATGACTGGACACCTACTCGTTAAAAGCGATGTTTATAGCTATGGGGTTGTCTTGTTAGAATTGTTGACCGGAAGGAAACCTGTGGAAATGTCACAGCCAACTGGACAAGAGAATCTTGTAACTTGGGCAAGGCCAATTCTTAGAGTTAAGGAGCAGTTAGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTATCCAAAGGAAGATTTTTTCCGTGTTTGCACTATTGCTGCAGCCTGTGTTGCACCTGAAGCAAGTCAACGACCTACAATGGGGGAAGTGGTACAGTCACTTAAAATGGTTCAGCGCATCACAGGAAATCATGATCCTGCATTACCGTCATCCAATACAAGACCCAACCTGAGACAGTCCTCTGCGACTTATGACTCTGATGGGACATCTTCAATGTTTTCTTCTGGTCCTTACTCTGGTCTAAGTGCCTTTGACTATGACAACACTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1908 0.4182 MGGFEMGQCILLKRVFVLLFSTVFIVECGAYDTTLEASHLSISPMHAIPSVMAHPPLPPFLSNCCEKDMVLKRGSEGCHCVYPIKLDLLLLNVSENPDWNLFLDELAAQLGMRATQIELINFYVHSLLTLNISMYITPRKEISFSAKEASKINSSLLFHKVRLDSRFVGDYRVLNLTWFRPPTPSKAPTFAASTVKTPERRVPTATSSSTSDRGRHSNLLVILGIITGILIMSIICVLILCLCTLRPKTKRPAETEKPRIEHAVSSVASHPHPTSTRFISYEDLREATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKELLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCSLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKLAPEGRVNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVEMSQPTGQENLVTWARPILRVKEQLEELADPRLGGRYPKEDFFRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITGNHDPALPSSNTRPNLRQSSATYDSDGTSSMFSSGPYSGLSAFDYDNTSRTAVFSEDLHEGR 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03607 635 Pfam Protein kinase domain 294 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03607 635 MobiDBLite consensus disorder prediction 574 603 - -
Mepo4g03607 635 Gene3D Phosphorylase Kinase; domain 1 253 368 - -
Mepo4g03607 635 PANTHER OS01G0750732 PROTEIN 62 582 - -
Mepo4g03607 635 CDD STKc_IRAK 297 567 - -
Mepo4g03607 635 Gene3D Transferase(Phosphotransferase) domain 1 369 579 - -
Mepo4g03607 635 MobiDBLite consensus disorder prediction 189 213 - -
Mepo4g03607 635 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Mepo4g03607 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mepo4g03607 635 ProSiteProfiles Protein kinase domain profile. 291 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03607 635 FunFam Receptor-like serine/threonine-protein kinase ALE2 271 368 - -
Mepo4g03607 635 FunFam Receptor-like serine/threonine-protein kinase ALE2 369 585 - -
Mepo4g03607 635 SUPERFAMILY Protein kinase-like (PK-like) 266 567 IPR011009 -
Mepo4g03607 635 MobiDBLite consensus disorder prediction 199 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03607 Mepo-Chr4 45465486 45469991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03607 48 635 Receptor kinase-like Gene Family AT4G02010 72.297 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mepo4g03607 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03607 - - gmx:100792818 987.638