Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03602 ATGGAGAAGAAAGAGATGGGTTTAAGTGTGAAGAGTGAGGATGTTGTTGTTGATTCTTCCTCATCTTTGCTAAATGGTTATCAATTTTCAAGCGTGTTTGATTTCTGTGAGGTTGAAAGGAGTTCTTCTTTAGGGTTTATGGAGTTACTTGGTGGTCATGACTATACTCCTCTCCTTGATGTACCACAACTATCAACCATGTCTACTGTTAAGGCTTCATCTGACACTACTGGAAAAGAGTGTTCTGAGGTTTTGAACCAGCAACAACCTGCAACTCCTAACTCTTGTTCGATTTCATCAGCATCTAGTGAAGCAGTCAATGATAATAAGACTCTTGTTGACCAAGCAGAAGAAGATGAAGAAGAAGAAAAGCAAAAGACAAACAAACAGTTGAAAACGAAGAAGACAAATCTAAAGAGACAGAGAGAACCAAGATTTGCTTTCATGACGAAAAGCGAGGTTGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAATAGCCCCTTTCCAAGGAGCTACTATCGTTGCACCACTGCTTCATGTAATGTCAAGAAACGTGTGGAACGTTCTTATACTGATCCAAGCATTGTAGTCACAACTTATGAAGGCCAACACACACATCCAAGTCCAACTATGTCCCGTTCCGCCTTTGCCGGAGTTCAAATACCACCACCCGCCGGTGTAGTCTCGGGTGGATTTCCAGCTACTAACTTTGGTTCAGTTTTGCAAGGGAACTACTTATCACAATATCATCAACAACCCTATCAACATCAACAACTACTTGTTAATACATTGTCTTCTTTGAGTCATCCTTATAACAATTCTTCATCATTCAAGAATTCACCTTTTACTACTCAAGAGAGAGTACAACTTTGTAATCCAGGAACAACTGCATTTCTTAGGGATAATGGGCTGCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 978 0.4008 MEKKEMGLSVKSEDVVVDSSSSLLNGYQFSSVFDFCEVERSSSLGFMELLGGHDYTPLLDVPQLSTMSTVKASSDTTGKECSEVLNQQQPATPNSCSISSASSEAVNDNKTLVDQAEEDEEEEKQKTNKQLKTKKTNLKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSYTDPSIVVTTYEGQHTHPSPTMSRSAFAGVQIPPPAGVVSGGFPATNFGSVLQGNYLSQYHQQPYQHQQLLVNTLSSLSHPYNNSSSFKNSPFTTQERVQLCNPGTTAFLRDNGLLQDVVPSHMLKEE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03602 325 Pfam WRKY DNA -binding domain 158 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03602 325 ProSiteProfiles WRKY domain profile. 152 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03602 325 FunFam WRKY transcription factor 57 143 217 - -
Mepo4g03602 325 PIRSF WRKY_txn_fact_IIc 1 325 IPR017396 GO:0003700
Mepo4g03602 325 Gene3D WRKY domain 143 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g03602 325 SMART WRKY_cls 157 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03602 325 MobiDBLite consensus disorder prediction 87 143 - -
Mepo4g03602 325 SUPERFAMILY WRKY DNA-binding domain 149 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g03602 325 MobiDBLite consensus disorder prediction 87 110 - -
Mepo4g03602 325 Coils Coil 106 141 - -
Mepo4g03602 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 264 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03602 Mepo-Chr4 45423361 45425335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03602 31 325 WRKY Transcription Factor Family AT2G47260 46.526 9.55e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g03602 WRKY 1.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03602 4 45423361 45425335 Mepo4g03602 4 45423361 45425335 ECH
Mepo3g03800 3 47504112 47505815 Mepo4g03602 4 45423361 45425335 PCT