Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03588 ATGGATGTCAAAAATATCCTCGGAGGATTACCCAATTTTTCCTTCCCACTTCAGGAGAAGAATTCTAGCGAGGTGTATGCACTTACCGGTGGATTTGCACCTCTTATGCCAGCAGTTGATTTGTCTCTGTTGAAAAAAAAGCCTCCTTCAGACAAAAAGGTCATTTGGCGATGGCTTCCTTTCAAAAATTCTGCTCGTAAAGATGATCTTCAGCTTCACCATTGGATTCAAGTTGTAAATGGTGTTCCACCAACAGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTTGACATAACAAGATACACGGACGAGGAGTATGAGAAATATTTGGCAAATCCTAAATGGACCAAGGAGGAAACAGATCAACTGTTTGACTTGTGTGAGAGGTTTAATCTCCGATTTATTGTTATAGCTGATAGGTTCCCTTCATCTCGAACTGTTGAAGAATTGAAGGATCGATATTATAGTGTATCCCGGGCTATGTTAATTGCCAGGAATCCATCTTCTACGGATGTTGCAGTGGATCCACTTGTTCAGGAACCATATAACGTTTCACAGGAGATGGAGCGGAAACGAGCTCAGTCCCTGATCCTCTCTCAAACAAAGCAACAAGAGCGAAGAGATGAAGAGGTGCTTGCCGAAGCAAAAAGAATTGCTGACTTACGCATAATGACCAAGGTTGCCCGAGAGTCTGAGTTGGATGTTGCTTCAAAGGCTTGTGCAAACGTTACAGAGAGGGCCAACCCCGGTGAAACTGTATCTCCGTCAAATACAGAACTTCCACCAACAGTCGTGCCTTCCACGATATCGACGGATAATGCATCTACCGTAGCCTCTCTTCGCATGCTTTATGTATATTCAAGAACCTATGCACTTGGACAAATGGTGCAATCTGCAAGCTCATCAGCTGGACTTCGGACTATCAAACGTGTTGATCAAACTTTGCAGGAACTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTAGAACTAAGAAATGAAATACTATCCTTGCTGAATCTTCAGAAACAGCTGCAAAATAAGGAGGCTGAAGGTTCATCTTTCCGTGACGGGTCACACTGCGAAACAACGGGAACACCAAAGCGTTTGCATCGAGGCGGAGATCAGGATCTGACATTTGTTCCAGATAACACAAGTTCTGGGGGGGAAAGAATTGTTAAAAGGGATCAAAAGCGCAAGAAACTTCATCATCACCAGCCCAATCAAAAAGACAGAAAAAACTAA 1269 0.4326 MDVKNILGGLPNFSFPLQEKNSSEVYALTGGFAPLMPAVDLSLLKKKPPSDKKVIWRWLPFKNSARKDDLQLHHWIQVVNGVPPTGDYSFAKYNKSVDITRYTDEEYEKYLANPKWTKEETDQLFDLCERFNLRFIVIADRFPSSRTVEELKDRYYSVSRAMLIARNPSSTDVAVDPLVQEPYNVSQEMERKRAQSLILSQTKQQERRDEEVLAEAKRIADLRIMTKVARESELDVASKACANVTERANPGETVSPSNTELPPTVVPSTISTDNASTVASLRMLYVYSRTYALGQMVQSASSSAGLRTIKRVDQTLQELGVNLKPRVPTKAVCAEHLELRNEILSLLNLQKQLQNKEAEGSSFRDGSHCETTGTPKRLHRGGDQDLTFVPDNTSSGGERIVKRDQKRKKLHHHQPNQKDRKN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03588 422 SMART sant 112 161 IPR001005 -
Mepo4g03588 422 Gene3D - 85 172 - -
Mepo4g03588 422 MobiDBLite consensus disorder prediction 404 422 - -
Mepo4g03588 422 FunFam DNA methyltransferase 1-associated protein 1 84 171 - -
Mepo4g03588 422 SUPERFAMILY Homeodomain-like 113 163 IPR009057 -
Mepo4g03588 422 MobiDBLite consensus disorder prediction 357 422 - -
Mepo4g03588 422 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 20 418 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Mepo4g03588 422 Coils Coil 336 359 - -
Mepo4g03588 422 MobiDBLite consensus disorder prediction 370 384 - -
Mepo4g03588 422 Pfam SANT/Myb-like domain of DAMP1 88 162 IPR032563 -
Mepo4g03588 422 CDD SANT_DMAP1_like 116 158 - -
Mepo4g03588 422 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 302 365 IPR008468 GO:0005634|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03588 Mepo-Chr4 45318411 45326903 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g03588 DMAP1 6.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03588 K11324 - cave:132170322 581.637