Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03585 ATGGTTCCAAGAAGGTGTTTCCACTTTATTTTGTTGGTTCTAACATTGTTATGGTTCAGCTGCAGATCAGAAATGGAGTCTGATTTTGACAAATGGATATCATGGAACGTCAAGAATTACCAGAGAAAGACAATTTTGGAAAAGAGATATCGGAATGTTAGTGGCAATGGGCAAGGTCTTGATCCTAAGCTGAAGAAAGCTGAGAGTAATAAAATTAGATTAACAGTTAGTCAAGATGGTTCTGCTCAATTTAAGAGTATTATAGATGCTCTTAATAGCATTCAATTGAATAACACAAGGAGAGTGATTATCTCGATTGCACCGGGTTATTATAGGGAGAAAATTGTAATCCCAAAAACACTACCTTTCATAACATTTCTAGGGGACGTAAGGGATCCACCAACTATAACGGGAAATGATACACGGTCTGTCACAGGAGGCGATGGGGCTGAGTTGGAAACATTCAATAGTGCCACTGTTGCCGTGAATGCTAGCTATTTTATGGCCATCAACGTCAATTTTGAGAACACTGCTTCATTTCCCGTTGGATCGAAAGTAGAACAAGCTGTTGCGATTCGCATCACAGGAAATAAAGCTGCATTTTACAATTGCAAATTCTCTGGTGTTCAAGACACTCTGTACGACCACAAAGGCCTACATTACTTCAAAAACTGCACTATTCAAGGCTCAGTTGATTTCATTTGCGGTCATGGGAAGTCCCTGTACGAGGGTTGTACTATAAAATCCATATCCAAGAACGCAACCTCCATAACAGCGCAAAATGGTAAAAATTCGACACACGATACTGGATTTTCCTTTATAAATAGCATGGTAACGGGTAGTGGATCAGCTTATCTCGGAAGACCATGGGGAAATTATTCACAAGTTGTTTTCTCCTACACCTACATGGACAAGATTGTTCTGCCAGAAGGATGGGAAGATTGGAATAACACAAAGCGCTACTTGAATGCATATTATGGAGAATATAAGTGTAGTGGACCTGGATCCAACACCGCCGGAAGAGTCCCATGGGCACGGTTGCTAAATGACACGGCTGCTCAACCCTTTATTGGGACTCATTACATTGATGGGAACACTTGGCTTATTAGCCCTTAA 1116 0.4077 MVPRRCFHFILLVLTLLWFSCRSEMESDFDKWISWNVKNYQRKTILEKRYRNVSGNGQGLDPKLKKAESNKIRLTVSQDGSAQFKSIIDALNSIQLNNTRRVIISIAPGYYREKIVIPKTLPFITFLGDVRDPPTITGNDTRSVTGGDGAELETFNSATVAVNASYFMAINVNFENTASFPVGSKVEQAVAIRITGNKAAFYNCKFSGVQDTLYDHKGLHYFKNCTIQGSVDFICGHGKSLYEGCTIKSISKNATSITAQNGKNSTHDTGFSFINSMVTGSGSAYLGRPWGNYSQVVFSYTYMDKIVLPEGWEDWNNTKRYLNAYYGEYKCSGPGSNTAGRVPWARLLNDTAAQPFIGTHYIDGNTWLISP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03585 371 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 368 - -
Mepo4g03585 371 Pfam Pectinesterase 74 365 IPR000070 GO:0030599|GO:0042545
Mepo4g03585 371 SUPERFAMILY Pectin lyase-like 72 368 IPR011050 -
Mepo4g03585 371 Gene3D - 66 370 IPR012334 -
Mepo4g03585 371 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Mepo4g03585 371 FunFam Pectinesterase 69 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03585 Mepo-Chr4 45292630 45294730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03585 74 368 Carbohydrate Esterase AT5G47500 45.791 4.53e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03585 K01051 - pvy:116132618 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03585 4 45292630 45294730 Mepo4g03585 4 45292630 45294730 ECH
Mepo3g03402 3 44066284 44068854 Mepo4g03585 4 45292630 45294730 PCT