Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03570 ATGGGGGAAAGATTGGGTGCTGAAAATTATCATTTTTACGGTGTTGGGGGTTCATCTGATTTGAGTGGGATGGGGAAGAGGTCAAGAGAATGGAATTTGAATGATTGGAGATGGGATGGTGATTTGTTTATAGCTAGCCGTGTGAATCCGGTGCAGGCGGAGAGTTTGCGAGTGGGACAACAATTTTTCCCACTAGGGTCTGGGATCCCGGGGGCTGGAGGTTCTTCCAATACGTCTTCTTCATGCTCCGAGGAAGGAGATCTTGAGAAGGGGGATAAGGAAGGGGAGAAGAAAAGGAGAGTTATTGTGCTGGAAGATGATGGTTTGAATGATGAAGCTGGTGCACTTAGCTTAAATCTTGCAGGACATGTTTCCCCGGCAGTGGAAAGGGACGGAAAAAAGAGTAGAGGAGCTGGAGGAACTTCGAATCGAGCTGTTTGTCAGGTTGAAGACTGTGGTGCAGATCTGAGTAGAGGTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCATTCTAAGGCTAGTAGGGCTCTTGTGGGAAATGCAATGCAGAGGTTTTGTCAACAGTGTAGTAGGTTTCACATACTTCAAGAGTTCGATGAAGGAAAGAGAAGTTGTCGAAGACGCTTGGCTGGCCATAACAAACGGAGAAGGAAAACAAATCAAGAAGCTGTTCCTAATGGAAGTCCAACAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGCCTACAGATCAGGATCTACTAACTCATCTTCTAAGGAGTCTTGCAAGTCAGAACGACGAACAAGGGAGCAAGAACTTGTCAAACCTTTTACGAGAACAAGAGAATTTGTTGAGAGAAGGGGGTTCTTCAAGAAATTCAGGGATGGTATCAGCTTTATTCTCCAATGGTTCTCAGGGGTCTCCAACTGTTATAACACAACATCAAACTGCATCTATGAATCAAATGCAACAAGAAATGGTGCATACACATGATGTTAGGACCTCTGATCATCAACTCATATCTTCAATAAAGCCCAGCATTTCAAACAGTCCTCCGGCTTACTCGGAAGCAAGAGATAGTAGTGGACAAACAAAGATGAATAATTTTGATTTGAATGACATATATGTTGACTCAGACGATGGCACGGAAGATCTAGAAAGACTGCCCGTCTCTACAAATCTTGCTACTAGCTCTGTTGACTACCCTTGGACACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCTAGCGGAGAAGCCCAGAGTCGCACAGACCGAATTGTTTTTAAACTCTTCGGTAAAGAGCCAAATGAATTTCCTCTTGTACTTAGAGCACAGATTCTAGATTGGTTATCCCACAGTCCTACTGATATTGAGAGCTACATACGCCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCTGAGGCTGTGTGGGAAGAACTTTGCTGTGATCTGACTTCCAGTTTGATTAAGCTGCTGGATGTCTCAGATGATATGTTTTGGAGGACTGGATGGGTTCATATCAGAGTGCAACATCAAATGGCATTCATTTTCAACGGTCAAGTTGTCATAGATACATCACTACCTTTCCGAAGCAACAATTATAGCAAAATTTGGACTGTTAGTCCAATTGCTGTACCGGCATCAAAGAGAGCTCAATTTTCTGTTAAAGGTGTCAACCTGATGCGCCCTGCCACAAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGTCTGTGAAGATGCTCATGAGTCAACGGATCAATACTCCGAGGAGCTTGATGAACTTCAGTGCATCCAATTTTCATGTTCTGTACCTGTGACAAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTCTTTCCTTTCATAGTGGCAGAAGAGGATGTTTGCTCAGAGATCCGCATGCTTGAACCTCTACTAGAATCAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAAATTAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATGGGCTGGCTTCTTCACAGAAGCCAGTTGAAATATAGGATGGTTAACTTGAACTCTGGTGTAGATCTCTTTCCATTAGAACGGTTCACGTGGCTCATGGAGTTTTCAATGGACCATGATTGGTGTGCAGTGGTGAAAAAACTGTTGAACCTACTCCTTGATGAAACTGTGAATAAAGGAGATCACCCTACATTGTATCAAGCACTTTCAGAGATGGGTCTTCTTCACAGAGCTGTTAGGAGAAATAGCAAACAGTTAGTGGAGCTGCTTTTGCGATATGTTCCTGACAATACATGTGATGAACTAGGACCCAAAGACAAGACGCTAGTTGGTGTAAAGAATCATAGCTACTTGTTTAGACCTGATGCTGTTGGTCCTGCCGGTTTGACACCACTTCATATAGCAGCGGGAAAAGATGGTTCCGAGGATGTACTGGATGCTCTGACTAATGATCCTCGCATGGTGGGAATTGAGGCATGGAAGAATGCCCGTGACAGTACAGGCTCGACACCTGAGGATTATGCGCGATTACGTGGCCATTATACTTACATTCACTTGGTGCAGAAAAAAATTAACAAAACACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCCAGCAATACAACAGAGAGCAATAAAAACCCGAAGCAAAATGAGTCATTCACTAGCTTAGAGATCGGAAAAGCTGAAGTAAGACGTAGCCAAGGGAACTGTAAACTCTGTGATACTAAAATTTCTTGTAGAACTGCAGTAGGAAGGTCTATGGTATACAGACCTGCAATGCTCTCTATGGTGGCCATAGCAGCAGTCTGTGTTTGTGTGGCTCTTCTGTTTAAGAGCTCACCCGAAGTTCTATACATGTTCCGTCCTTTCAGATGGGAATCATTGGATTTTGGAACAAGCTAA 3012 0.4303 MGERLGAENYHFYGVGGSSDLSGMGKRSREWNLNDWRWDGDLFIASRVNPVQAESLRVGQQFFPLGSGIPGAGGSSNTSSSCSEEGDLEKGDKEGEKKRRVIVLEDDGLNDEAGALSLNLAGHVSPAVERDGKKSRGAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNQEAVPNGSPTNDDQTSSYLLISLLKILSNMHSDRSDQPTDQDLLTHLLRSLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQTASMNQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSEARDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDMFWRTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGVNLMRPATRLMCALEGKYLVCEDAHESTDQYSEELDELQCIQFSCSVPVTNGRGFIEIEDQGLSSSFFPFIVAEEDVCSEIRMLEPLLESSETDPDIEGTGKIKAKSQAMDFIHEMGWLLHRSQLKYRMVNLNSGVDLFPLERFTWLMEFSMDHDWCAVVKKLLNLLLDETVNKGDHPTLYQALSEMGLLHRAVRRNSKQLVELLLRYVPDNTCDELGPKDKTLVGVKNHSYLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPRMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINKTQGAAHVVVEIPSNTTESNKNPKQNESFTSLEIGKAEVRRSQGNCKLCDTKISCRTAVGRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFRPFRWESLDFGTS 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 67 99 - -
Mepo4g03570 1003 Gene3D - 137 208 IPR036893 GO:0003677|GO:0005634
Mepo4g03570 1003 Pfam SBP domain 147 220 IPR004333 GO:0003677
Mepo4g03570 1003 SUPERFAMILY SBT domain 145 225 IPR036893 GO:0003677|GO:0005634
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 85 99 - -
Mepo4g03570 1003 SUPERFAMILY Ankyrin repeat 755 889 IPR036770 -
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 350 380 - -
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 410 449 - -
Mepo4g03570 1003 Gene3D - 734 935 IPR036770 -
Mepo4g03570 1003 FunFam Squamosa promoter-binding-like protein 14 138 208 - -
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 211 237 - -
Mepo4g03570 1003 MobiDBLite consensus disorder prediction 328 380 - -
Mepo4g03570 1003 ProSiteProfiles Zinc finger SBP-type profile. 144 221 IPR004333 GO:0003677
Mepo4g03570 1003 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 69 888 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03570 Mepo-Chr4 45152040 45160247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03570 16 1003 SBP-box Gene Family AT3G60030 56.293 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo4g03570 SBP 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03570 - - gmx:100809806 1625.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03570 4 45152040 45160247 Mepo4g03570 4 45152040 45160247 ECH