Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03567 ATGAACGGAAAAATATTAGTCTCTGGTGTATCCATCATTCTTGTGGTGGGTGTTGCCATCGGTGTTGTTGTCGTTGTTAACAAAAAGGATGATCCTGCATTAGCAGCACACCAAAAGAATGTGCAAACCATGTGTCAAGCAACTGAAGATCAAAAACTTTGTCATGACACTCTTGGCTCTGTGAAACCCGCTAATTCCTCTGACCCATCAGCTTATTTAGCAGCTGCAGTTCAAGCAAGTGCTCAAAGTGTTATCCTTGCGTTGAATATGAGCGATAAGTTAACGGTTGAACATGGCAAGGACAAACCTGGTGTCAAAATGGCCCTTGATGATTGCAAAGACTTAATGCAATTTGCTCTTGACAGCCTCGAATCATCGGCTAATTTGGTTCGCGATAACAACATTCAAACCATTCATGATCAAACACCTGATTTTAGGAACTGGTTGAGTGCTGTTATCTCATACCAACAATCATGCATGGATGGATTTGATAACGGAACGGACGGTGAGGATCAAGTAAAGCAACAGTTGCATACAGAAAGTTTGGACCAAATGGAGAAACTAACCGGTATTACACTTGACATTGTAACTAGTATGTCTAACATCCTTCAGACTTTCGACTTGAAGTTGAATTTGAATCCAGCTTCTCGTCGTCTTATGGAGGCTAATGAGGTTGATGATGAAGGATTGCCCAAGTGGTTCTCGGCTGCAGATCGTAAGCTATTGGCAAACGCTGGTGGAGGTCCTCCACCAAACGCAGTAGTTGCTAAAGATGGTAGTGGTAAATTTAAAACAGTAAAAGAAGCTATTGACTCCTATCCTAAGGGATTCAAAGGCAGATACATTATCTATGTTAAGGCTGGGGTCTATGACGAGTACATCACCATTCCCAAAACATCAATAAATATTCTTATGTATGGCGACGGTCCTACAAAGTCCATTATCACCGGTCACAAGAACTTCGTCGACGGCGTTAAGACAATGCAAACTGCCACTTTTGCAAATGTTGCAAATGGATTCATTGCAAAGTCAATAGCATTCGAAAACACAGCTGGACCAGGAAAGCACCAAGCAGTGGCATTTAGAAACCAAGGAGACATGTCTGCTTTCTTCGATTGCGCCATGCATGGTTTCCAGGACACATTATACGTCCAAGCCAATCGTCAATTCTATCGCAACTGCGAAATCTCTGGTACCATAGACTTCATATTCGGCTCATCACCAACCCTAATTCAAAACTCTAGAATCATTGTGCGAAAGCCAGGACCTAGTCAATTCAACACCGTAACCGCAGACGGAACAAAACAACGAAACATGGCCACAGGAATAATAATCCAGAATTGCGAAATCGTTCCAGATAGGGATTTGTTCCCAGTTAGGAACCAATTCAAATCGTATTTGGGCAGACCATGGAAGGCATTTGCTAAGACAGTGGTTATGGAATCTAATATTGGTGATGTCATTGCACCAGAAGGGTGGACTCCATGGGCTGGGACTCAATTTCTTGATACATTGTATTATGCTGAATTTGCCAATACTGGACCTGGTGCTAATCTTAATGGAAGGGTTAAGTGGAAAGGTTATCATCCTCAGATTTCTAAGAATGAAGCTACTCAATTCACTGCAGAGCAATTCCTTAAAGCTGGACCTACTGGAAGAGCTGATGATTGGTTGAAGGCTACTGGTGTTGCCCTAGGTGTTGTTGCTCTTGTCCGAACCAACAATGGTCCCGCAGATGCTAACAACGGCGGTGAATTGAACTCGCATACTAAAGCTGTTACAGCTGTGTGTCAAAACAGCGATGACCAAAAATTTTGTGCTGATACTCTTAGTCCTGTTAACACCTCAGACCCAAATGATTACATAAAAGCAGTGGTAAAAACTTCTATTGAAAGTGTCATCAAAGCCTTCAATATGACCGATAAGCTCGCGGTTGAAAACGGAAAAAATAACCAAAGTACTAAAATGGCACTTGATAATTGCAAAGACTTATTAGAATTCGCGATTGATGAATTAGAAGCCTCGAGGATTTTAGCTAATGATAACAGCAGCGTTCACAATGTTAATGAGCGCGCTGCAGACCTTAAAAATTGGTTAGGTGCTGTTTTTGCCTACCAACAATCATGTCTTGACGGTTTTGATACAGATGGCGAAAAGCAGGTTCAATCACAATTGCAAACAGGTAGTTTGGATCATGTAGGAAAACTTACTGCGTTAGCACTTGATGTTGTGACTGCGATTTCAAAAGTACTCGCTGCACTTGACTTGGATTTGAATGTGAAACCTTCATCTAGACGGCTTTTTGAGGTGGATGAAGACGGTAATCCAGAATGGATGTCCGGTGCAGATCGTAAGTTGTTGGCTGATATGAGTACGGGGATGTCTGTTACGCCTAATGTTGTTGTTGCGAAAGATGGTAGCGGTAAATTTAAAACGGTTCTTGATGCTATTAATTCTTACCCCAAAAATCATCAAGGTAGATATGTCATCTACGTCAAGGCTGGTGTCTATGACGAATATATTCAGATTGACAAAACTAAGAAGAATATTTTGATATACGGCGATGGCCCTACAAAGACCATTATCACTGGTAAAAAGAATTTTGTAGATGGTTGGAAGACTATAAAAACTGCTACATTCTCTACTGTCGCGGAAGGTTTCATTGCAAAGGCAATGACATTTGAGAACACAGCCGGAGCAAACAAACACCAAGCAGTAGCACTTCGTGTGCAAGGCGATAAATCAGCTTTCTACGATTGCGCCATGCGAGGTTACCAAGACACATTGTATGCACACGCCCACCGTCAATTCTATAGAAACTGCGAAATTTCAGGCACAGTGGATTTTATTTTCGGCTACGCATCAACAATAATACAGAACTCAAAGATAATAGTTCGGAAACCCGAGGCAAATCAACAAAACATAATTGTAGCCGATGGAACAGTCCAAAAGAACATGCCAACAGGAGTAGTACTTCAGAATTGTGAGATCATGCCAGAGCCAGCACTACAACCTGATAGATTGAAGGTGAGATCGTTTTTAGCAAGACCATGGAAGGCATATTCAAGGGCAATATTTATGGAAAATACCATTGGTGATTTAATTCAACCAGATGGATTTCTTCCATGGGCAGGGACTCAATTCCTTGATACATGTTTCTTTGCTGAGTATGCTAACACTGGACCAGGTTCAAATGTTCAAGCAAGAGTTAAGTGGGGCAAAGGTGTTCTTAGCAAAGCTGATGCAACTAAATATACTGCTAGTCAATGGATTGAAGGTGGCGTATGGTTGCCTGCCACTGGTATACCCTTTGATCTTGGATTCACTAAAGGTTGA 3336 0.417 MNGKILVSGVSIILVVGVAIGVVVVVNKKDDPALAAHQKNVQTMCQATEDQKLCHDTLGSVKPANSSDPSAYLAAAVQASAQSVILALNMSDKLTVEHGKDKPGVKMALDDCKDLMQFALDSLESSANLVRDNNIQTIHDQTPDFRNWLSAVISYQQSCMDGFDNGTDGEDQVKQQLHTESLDQMEKLTGITLDIVTSMSNILQTFDLKLNLNPASRRLMEANEVDDEGLPKWFSAADRKLLANAGGGPPPNAVVAKDGSGKFKTVKEAIDSYPKGFKGRYIIYVKAGVYDEYITIPKTSINILMYGDGPTKSIITGHKNFVDGVKTMQTATFANVANGFIAKSIAFENTAGPGKHQAVAFRNQGDMSAFFDCAMHGFQDTLYVQANRQFYRNCEISGTIDFIFGSSPTLIQNSRIIVRKPGPSQFNTVTADGTKQRNMATGIIIQNCEIVPDRDLFPVRNQFKSYLGRPWKAFAKTVVMESNIGDVIAPEGWTPWAGTQFLDTLYYAEFANTGPGANLNGRVKWKGYHPQISKNEATQFTAEQFLKAGPTGRADDWLKATGVALGVVALVRTNNGPADANNGGELNSHTKAVTAVCQNSDDQKFCADTLSPVNTSDPNDYIKAVVKTSIESVIKAFNMTDKLAVENGKNNQSTKMALDNCKDLLEFAIDELEASRILANDNSSVHNVNERAADLKNWLGAVFAYQQSCLDGFDTDGEKQVQSQLQTGSLDHVGKLTALALDVVTAISKVLAALDLDLNVKPSSRRLFEVDEDGNPEWMSGADRKLLADMSTGMSVTPNVVVAKDGSGKFKTVLDAINSYPKNHQGRYVIYVKAGVYDEYIQIDKTKKNILIYGDGPTKTIITGKKNFVDGWKTIKTATFSTVAEGFIAKAMTFENTAGANKHQAVALRVQGDKSAFYDCAMRGYQDTLYAHAHRQFYRNCEISGTVDFIFGYASTIIQNSKIIVRKPEANQQNIIVADGTVQKNMPTGVVLQNCEIMPEPALQPDRLKVRSFLARPWKAYSRAIFMENTIGDLIQPDGFLPWAGTQFLDTCFFAEYANTGPGSNVQARVKWGKGVLSKADATKYTASQWIEGGVWLPATGIPFDLGFTKG 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03567 1111 FunFam Pectinesterase 248 567 - -
Mepo4g03567 1111 FunFam Pectinesterase 793 1108 - -
Mepo4g03567 1111 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Mepo4g03567 1111 NCBIfam pectinesterase inhibitor domain 26 198 IPR006501 GO:0004857
Mepo4g03567 1111 NCBIfam pectinesterase inhibitor domain 586 725 IPR006501 GO:0004857
Mepo4g03567 1111 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 591 747 IPR035513 -
Mepo4g03567 1111 SMART PMEI_2 36 195 IPR006501 GO:0004857
Mepo4g03567 1111 SMART PMEI_2 588 743 IPR006501 GO:0004857
Mepo4g03567 1111 CDD PMEI-like_3 43 201 - -
Mepo4g03567 1111 SUPERFAMILY Pectin lyase-like 796 1106 IPR011050 -
Mepo4g03567 1111 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 200 IPR035513 -
Mepo4g03567 1111 FunFam Pectinesterase 37 200 - -
Mepo4g03567 1111 Pfam Plant invertase/pectin methylesterase inhibitor 40 195 IPR006501 GO:0004857
Mepo4g03567 1111 Pfam Plant invertase/pectin methylesterase inhibitor 592 741 IPR006501 GO:0004857
Mepo4g03567 1111 CDD PMEI-like_3 595 749 - -
Mepo4g03567 1111 ProSitePatterns Pectinesterase signature 2. 943 952 IPR033131 -
Mepo4g03567 1111 FunFam Pectinesterase 589 748 - -
Mepo4g03567 1111 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Mepo4g03567 1111 Gene3D Invertase/pectin methylesterase inhibitor family protein 589 748 IPR035513 -
Mepo4g03567 1111 Gene3D - 793 1108 IPR012334 -
Mepo4g03567 1111 Gene3D - 250 567 IPR012334 -
Mepo4g03567 1111 Pfam Pectinesterase 799 1093 IPR000070 GO:0030599|GO:0042545
Mepo4g03567 1111 Pfam Pectinesterase 252 547 IPR000070 GO:0030599|GO:0042545
Mepo4g03567 1111 SUPERFAMILY Pectin lyase-like 248 548 IPR011050 -
Mepo4g03567 1111 PANTHER PECTINESTERASE 18 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03567 Mepo-Chr4 45122131 45129981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03567 5 654 Carbohydrate Esterase AT3G05610 37.727 1.72e-127 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03567 K01051 - gmx:100775246 841.647