Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03564 ATGGGTAAGTTGAATGGTGTTGGTGAGATAGAGAATAATCATGATGAAGCAACAACGTCAGAGAAAAATTCAACAGAAACAAGTAGTACAAATGTTGTTACAAACGGCGAAAAGGACAAAACAAAAGAAAAACAAGAGACAGTACCATTTCACAAATTATTCACTTTTGCAGATTCTACTGACATTTTATTAATGATTGTTGGTACTATCGGTGCTATTGGAAACGGTTTGGGTTTACCTCTTATGACATTATTGTTCGGTCAAATGATTGATAGTTTTGGTAGTAACCAAAATAACACCACCGATGTTGTTGATGAAGTGTCCAAGGTTTCTTTGAAATTTGTATACTTGGCAGTAGGATCTGGGGTGGCAGCATTTCTCCAGGTGAGTTGTTGGATGGTTACTGGGGAAAGACAAGCTGCAAGAATAAGAGGATTGTATTTGAAAACAATATTAAGACAAGATGTTACTTTCTTTGATAAAGAAACAAACACAGGAGAAGTTGTAGGGAGAATGTCTGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTTGGGAAGTTTCTGCAGCTAATAGCAACATTTATTGGGGGTTTTGTGATAGCATTTACGAAAGGGTGGCTTCTTACTGTTGTGATGATGTCAACACTTCCACTTCTTGTTGTGTCAGGTGCTGCCATGGCTGTAATCATAGGCAGAATGGCTTCTAAAGGTCAAACTGCTTATGCAAAAGCTGCACATGTTGTTGAACAGACAATTGGCTCCATAAGAACGGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTTTTGAAGGTACTATAGCTGGAGCAGGACTAGGCACAGTTATGTTTGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGTGCGAAGATGATAATGGAAAAAGGATATAATGGCGGCACCGTGATTAATGTGATTATCGCCGTGTTAACTGCTTCCATGTCTCTTGGCCAGGCATCACCAAGTATGAGTGCTTTTGCGGCAGGTCAGGCAGCGGCTTACAAAATGTTTGAAACAATTAAGAGAAAGCCAGAGATAGATGCTTATGATCCAAATGGGAAAGTATTAGAGGATATTCAAGGTGAAATAGAGTTGAAGGAAGTTTATTTCAGTTATCCGGCAAGACCTGAGGAGCTGATATTCAATGGATTCTCTCTTCATATATCAAGCGGAACAACCGCGGCATTGGTTGGACAAAGTGGAAGTGGAAAGTCCACAGTTATTAGTTTGGTGGAAAGATTCTATGATCCACAGGCAGGTGAAGTACTTATCGATGGAATTAACATGAAAGAACTTCAGCTTAGATGGATCAGAGGGAAAATTGGTCTTGTCAGCCAGGAGCCAGTGTTATTTGCATCCAGCATTAAGGATAACATTGCATATGGTAAAGATGGAGCAACAATTGAAGAAATAAGATCTGCATCTGAACTTGCAAACGCCGCCAAATTCATTGATAAACTTCCACAGGGATTGGACACAATGGTTGGTGACCATGGAACTCAACTGTCTGGTGGACAGAAGCAGCGCATTGCGATTGCAAGAGCAATCCTTAAGAATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAAAGGGTGGTGCAAGAGGCTCTGGATAGAATCATGGTCAACAGAACCACAGTTGTCGTTGCACATCGCTTAAGCACAGTGAGGAATGCTGACATGATTGCTGTAATCCATAGAGGGAAAATGGTTGAGAAAGGAACACACTCTGAATTACTGAAGGATCCTGAAGGAGCTTATTCACAACTCATTCGGTTACAAGAAGTAAACAAGGAATCAGAAGAAACTACAGACCATCACGGTAAGAGAGAACTTTCTGCAGAGTCCTTTAGACAGTTGAGTCAAAGGAAGTCGCTACAACGATCTATCAGTAGGGGATCATCTATAGGGAATAGTAGTCGCCATTCATTTTCGGTTTCGTTCGGTTTACCAACGGGAGTTAATGTCGCTGATCCTGACCTTGAAAATGTGCCAACCAAAGAAAAAGAACAAGAAGTTCCGCTGAGACGCCTTGCTTCCCTTAACAAGCCAGAGATTCCCGTTCTTCTTATTGGAAGTTTAGCTGCCATAGCTAACGGTGTCATACTTCCAATATTCGGCGTTTTGATCTCCAGTGTCATCAAAACATTTTATGAACCGTTTGATGAGATGAAGAAGGACTCCAAGTTTTGGGCGATAATGTTTATGCTCCTTGGTCTTGCATCATTGGTGGTGATTCCGGCGCGCGGTTACTTTTTCTCTGTGGCTGGATGCAAGTTAATCCAACGGATCAGGCTATTATGTTTTGAGAAGGTGGTGAATATGGAGGTTGGTTGGTTCGATGAGCCTGAAAACTCGAGCGGCGCAGTTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTACGTGCCCTTGTTGGCGATGCACTTGGACTGTTGGTTCAGAATTTGGCATCTGCATTGGCTGGTTTGATTATTGCTTTCATTGCGAGCTGGCAGCTGGCGCTGATTATTCTTGTGTTGATTCCTCTTATTGGGTTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGCGGAGACGCAAAGATGATGTACGAGGAGGCTAGTCAAGTTGCGAATGATGCAGTTGGAAGCATAAGAACTGTGGCTTCTTTCTGTGCAGAAGATAAGGTTATGGAACTATATAGGAAGAAATGTGAAGGTCCCATGAAAACAGGAATAAGGCAAGGGATAATCAGTGGATCAGGATTCGGTGTTTCGTTTTTCTTATTGTTTAGTGTCTATGCGACCAGTTTCTACGCAGGAGCTAGACTTGTGAAAGCTGGGAATACAACCTTCTCAGATGTTTTCCGGGTTTTTTTCGCTTTAACTATGGCAGCTATTGGTATTTCTCAGTCAAGTTCCTTTGCTCCCGACTCTAGTAAAGCAAAGTCAGCTACTGCTTCCATATTTGGAATGATTGATAAGAAGTCAAAGATTGATCCAAGTGAAGAGTCTGGTACCACTCTAGATAGCGTTAAAGGCGAAATTGAGCTTCGTCATATAAGCTTTAAGTATCCATCTCGACCTGATATTCAGATTTTCCGAGACCTCAACTTGACTATCCATTCTGGCAAGACAGTAGCACTTGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGATTGCTTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATTACACTTGATGGGATAGAAATTCGTCAGTTAAAGCTCAAGTGGTTAAGGCAACAAATGGGTCTTGTAAGCCAAGAACCAGTCTTATTCAATGACACTATCCGTGCCAATATTGCTTATGGAAAAGGTGGCAATGCAACTGAGGCAGAAATCATTGCTGCTGCTGAATTGGCTAATGCTCATAGGTTCATCAGTGGCTTACAACAGGGATATGATACTATAGTGGGAGAGAGGGGAACTCAACTATCAGGTGGGCAGAAGCAAAGGGTAGCTATTGCACGAGCAATAATCAAAAGTCCAAAGATTTTGTTACTTGATGAGGCAACAAGTGCATTAGATGCAGAATCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTAAATAGGACCACTGTGGTCGTGGCACATCGTTTATCTACAATTAAAAATGCAGATGTTATTGCTGTTGTCAAGAATGGAGTCATAGTAGAAAAAGGAAGACATGAAACACTTATTAACGTTAAAGATGGATTTTATGCTTCCTTAGTCCAACTTCACACTAGTGCTAAAACAGTATAA 3870 0.4121 MGKLNGVGEIENNHDEATTSEKNSTETSSTNVVTNGEKDKTKEKQETVPFHKLFTFADSTDILLMIVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQNNTTDVVDEVSKVSLKFVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFTKGWLLTVVMMSTLPLLVVSGAAMAVIIGRMASKGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVFEGTIAGAGLGTVMFVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFETIKRKPEIDAYDPNGKVLEDIQGEIELKEVYFSYPARPEELIFNGFSLHISSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINMKELQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKDGATIEEIRSASELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKESEETTDHHGKRELSAESFRQLSQRKSLQRSISRGSSIGNSSRHSFSVSFGLPTGVNVADPDLENVPTKEKEQEVPLRRLASLNKPEIPVLLIGSLAAIANGVILPIFGVLISSVIKTFYEPFDEMKKDSKFWAIMFMLLGLASLVVIPARGYFFSVAGCKLIQRIRLLCFEKVVNMEVGWFDEPENSSGAVGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFIASWQLALIILVLIPLIGLNGYVQMKFMKGFSGDAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGIISGSGFGVSFFLLFSVYATSFYAGARLVKAGNTTFSDVFRVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGMIDKKSKIDPSEESGTTLDSVKGEIELRHISFKYPSRPDIQIFRDLNLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRQLKLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIAAAELANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHTSAKTV 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03564 1289 SUPERFAMILY ABC transporter transmembrane region 703 1024 IPR036640 GO:0005524|GO:0016020
Mepo4g03564 1289 Gene3D ABC transporter type 1, transmembrane domain 112 1018 IPR036640 GO:0005524|GO:0016020
Mepo4g03564 1289 PANTHER ABC TRANSPORTER B FAMILY 27 629 IPR039421 -
Mepo4g03564 1289 ProSitePatterns ABC transporters family signature. 1184 1198 IPR017871 GO:0005524|GO:0016887
Mepo4g03564 1289 FunFam ABC transporter B family member 9 1011 1033 - -
Mepo4g03564 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1034 1282 IPR027417 -
Mepo4g03564 1289 MobiDBLite consensus disorder prediction 1 44 - -
Mepo4g03564 1289 Pfam ABC transporter 1063 1212 IPR003439 GO:0005524
Mepo4g03564 1289 FunFam ABC transporter B family member 9 52 385 - -
Mepo4g03564 1289 CDD ABC_6TM_Pgp_ABCB1_D2_like 712 1027 - -
Mepo4g03564 1289 Gene3D - 387 644 IPR027417 -
Mepo4g03564 1289 SMART AAA_5 1071 1264 IPR003593 GO:0016887
Mepo4g03564 1289 SMART AAA_5 416 602 IPR003593 GO:0016887
Mepo4g03564 1289 Pfam ABC transporter 408 556 IPR003439 GO:0005524
Mepo4g03564 1289 Pfam ABC transporter transmembrane region 722 994 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03564 1289 Pfam ABC transporter transmembrane region 65 340 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03564 1289 FunFam ABC transporter B family member 1 1034 1284 - -
Mepo4g03564 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 627 IPR027417 -
Mepo4g03564 1289 MobiDBLite consensus disorder prediction 630 650 - -
Mepo4g03564 1289 CDD ABC_MTABC3_MDL1_MDL2 389 627 - -
Mepo4g03564 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 723 1009 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03564 1289 SUPERFAMILY ABC transporter transmembrane region 51 373 IPR036640 GO:0005524|GO:0016020
Mepo4g03564 1289 FunFam ABC transporter B family member 1 702 1010 - -
Mepo4g03564 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1044 1281 IPR003439 GO:0005524
Mepo4g03564 1289 Gene3D - 1034 1288 IPR027417 -
Mepo4g03564 1289 MobiDBLite consensus disorder prediction 630 651 - -
Mepo4g03564 1289 ProSitePatterns ABC transporters family signature. 528 542 IPR017871 GO:0005524|GO:0016887
Mepo4g03564 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 66 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03564 1289 FunFam ABC transporter B family member 1 379 628 - -
Mepo4g03564 1289 CDD ABC_6TM_Pgp_ABCB1_D1_like 65 350 - -
Mepo4g03564 1289 CDD ABC_MTABC3_MDL1_MDL2 1044 1282 - -
Mepo4g03564 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 389 625 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03564 Mepo-Chr4 45081953 45089046 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03564 38 1288 Calmodulin-binding Proteins AT2G36910 46.044 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03564 K05658 - gmx:100777909 2160.96