Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03561 ATGAGTGTGGAGAATGATGTTGATGAGAAAGGGAATAACCATGATGATGAAGCAACAAGGTCAGAGAAGAACTCTGCAGAAACAAGTCCTATTGGCAAAAGGGACATACAAAAAGAAAAACCCAAGACAGTTCCATTTCACAAGTTGTTCTCGTTTGCAGATTCCATTGACATTTTATTAATGATTGTTGGAACTATCGGTGCTATTGGAAACGGTTTGGGTTTACCTCTTACGACATTATTGTTCGGTCAAATGATTGATAGTTTTGGTCGTAACCAAAGTAACACAGACGATGTTGTAGAACAAGTGTCCAAGGTGTCTTTGAAATTTGTATACTTGGCAGTAGGATCTGGGGTGGCAGCATTTCTTCAGGTGAGTTGTTGGATGGTTACAGGAGAAAGACAAGCTGCAAGAATAAGAGGATTGTATTTGAAAACAATATTAAGACAAGATGTCACTTTCTTTGATAAAGAAACAAACACAGGAGAAGTTGTAGGGAGAATGTCTGGTGATACTGTTTTAATTCAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGAATCTAATAACAACATTCATTGGGGGTTTTGTGATAGCATTTGTCAGAGGGTGGCTTCTTACTATTGTAATGATGTCAACTCTTCCAATTATTGTTGTATCAGTTGCTGTCATGGTTGTTATCATAGGCAGGATGGCTTCTAAATGTCAAACTGCTTATGCAAAAGCTGCACATGTTGTTGAACAGACAATTGGCTCAATAAGAACCGTTGCATCTTTTACTGGCGAAAAGCAAGCAATATCTAGTTATAACAAATTTCTTATAGATGCTTACATATTAGGAATTTATGAAGGTTCTCTAGCTGGAGTGGGGTTTGGCATATTTATGTTTGTTTCATTCTGTGGCTATGCTTTGGCTGTATGGTTTGGTGCAAAGATGATAATTGAAAAAGGATATGATGGGGGCACTGTGATTAATGTGATAACCGCCGTGTTAACTTCTTCCATGACTCTTGGCCAGGCATCACCAAGTATGAGTGCTTTTGCGGCGGGTGAAGCGGCAGCTTACAAAATGTTTGAAACAATTAAGAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAGTATTAGAGGATATTCAAGGTCAAATAGAGTTGAAGGAAGTTTATTTCAGTTATCCCACAAGACCTGAGGAGTTGATATTCAATGGATTCTCTCTTCACATATCAAGTGGAACAACCGTGGCATTGGTTGGACAAAGTGGAAGTGGAAAGTCCACAGTTATTAGTTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGAATTAACATGAAAGAATTTCAGCTCAGGTGGATCAGAGGAAAAATTGGTCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCCAGCATCAAGGATAACATTGCGTATGGAAAGGAAGAAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTAGCAAATGCTGCCAAATTCATTAACAAACTGCCACAGGGATTGGACACAATGGTTGGTGACCATGGAACTCAGCTGTCTGGTGGGCAGAAGCAGCGCATTGCGCTTGCAAGAGCAATCCTGAAAAATCCAAGAATTCTACTTCTTGATGAAGCTACAAGTGCACTTGATGCAAAATCTGAAAGGGCGGTGCAAGATGCTCTAGATAGAATCATGGTCAGCAGAACGACGATTGTTGTTGCTCATCGCTTGAGCACAATTAGGAATGCTGACATGATTGCTGTAATCCATAGAGGGAAAGTGGTTGAGAAAGGAACACACTTTGAATTACTCATGGATCTTGAAGGAGCATATTCACAACTTACACGCTTACAAGAAGTAAATACAGATCATCACAGGAAAAGTGAACTTTCTGCAGAATCCTTTAGACAGTCGAGTCAAAGGATGTCACTTCAAAGATCTATTAGTACAGGATCATCTATAGGGAATAGTAGTCGCCATTCATTTTCAGTTTCGTTTGATTTACCTACAAGAGTTAACGTTGCCTATCCTGAACTTGAAAGTTTTCCTACCAAAGAAAAAGGACTAGAGGTTCCGCTCAGCCGCCTTGCTTCCCTCAACAAGCCTGAGATACCAGTTCTTATTATTGGATGCTTAGCTGCCATAGGAAACGGTGTCATATTTCCAATATTTGGAGTTTTGATGTCTAGTGTTATCAAAACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCAGTAATGCTTATGCTCCTTGGTCTTGCATCATTGCTGGTGATTCCAGCACAGGCTTACTTTTTCTCTGTTGCGGGATGCAAATTAATCCAACGTATCAGACTAATATGTTTTAAGAAGGTGGTGAACATGGAGGTTGGTTGGTTTGATGAGCATGAAAACTCAAGTGGAGCAGTTGGTGCAAGATTCTCAGTAGATGCTGCTTCTTTGCGTTCCCTTATTGGTGATGCACTGGGACTGTTGGTTCAGAATTTTGCAACTGCGCTGGCTGGTTTGTTTATTGCTTTTGACGCAAGCTGGCAGCTGGCATTGATTATTCTTGCCTTGATTCCACTGGTTGGATTAAATGGATACATTCATATGAAATTCTTGAAGGGATTCAGCGCAGATGCAAAGATGATGTACGAGGAGGCCAGCCAGGTTGCTAATGATGCAGTTGGAAGCATAAGAACGGTGGCTTCTTTCTGTTCTGAAGACAAGGTTATGGAACTATATAGGAAAAAATGTGAAGGTTCCATGAAAACAGGGATAAGGCAAGGGATAATCAGTGGAACAGGATTCGGTGTTTCATTTTTCTTATTGTTTAGTGGCTATGCAACCAGTTTCTATGCAGGAGCTAGACTTGTGAAAGCTGGGGATACCACATTTTCACATGTTTTCCGGGTTTTCCTTGCATTAACTATGGCAGCTGTTGGTATTTCCCAGTCAAGTTCCTTTGCTCCTGACTCCAGCAAAGCAAAGTCAGCTACTGCTTCCATATTTGAAATAATTGATAAGAAGTCAAAGATAGATCCAAGTGATGAGTCTGGTATCACTCTAGATAGGGTTAAGGGGGAAATCGAACTCCGCCATGTTAGCTTCAAGTATCCATCTAGGCCTAACATTCAGATTTTCAAAGACCTCAGCTTGACCATCCATTCTGGCAAGACTATGGCACTTGTTGGTGAAAGTGGAAGTGGGAAATCAACGGTGATTGCTTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGGATAGAAATTCGTCAGTTACAGTTAAAGTGGTTAAGGCAGCAAATGGGTCTTGTAAGCCAAGAGCCAGTTTTATTCAATGACACTATCCGTGCTAATATTGCCTATGGAAAAGGTAGCAATGCAACTGAGGCAGAAATCATAGCTGCATCTGAATTGGCCAATGCTCATAGATTCATTAGTAGCTTACAGCAGGGTTATGATACAATAGTGGGAGAGAGGGGAACTCAATTATCAGGTGGGCAGAAGCAAAGGGTAGCTATTGCACGAGCAATAATCAAAAGTCCAAAGATTTTGTTACTTGATGAGGCAACAAGTGCATTAGATGCAGAATCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTAAATAGGACCACTGTGGTCGTGGCACATCGTTTATCTACAATTAAAAATGCAGATGTTATTGCTGTTGTCAAGAATGGAGTTATAATGGAAAAGGGAAGGCATGAAACTCTTGTTAACGTTAAGGATGGATTTTATGCTTCTTTAGTCCAACTTCATACTAGTGCTAAAACAGTATGA 3840 0.4029 MSVENDVDEKGNNHDDEATRSEKNSAETSPIGKRDIQKEKPKTVPFHKLFSFADSIDILLMIVGTIGAIGNGLGLPLTTLLFGQMIDSFGRNQSNTDDVVEQVSKVSLKFVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLNLITTFIGGFVIAFVRGWLLTIVMMSTLPIIVVSVAVMVVIIGRMASKCQTAYAKAAHVVEQTIGSIRTVASFTGEKQAISSYNKFLIDAYILGIYEGSLAGVGFGIFMFVSFCGYALAVWFGAKMIIEKGYDGGTVINVITAVLTSSMTLGQASPSMSAFAAGEAAAYKMFETIKRKPEIDAYDPNGKVLEDIQGQIELKEVYFSYPTRPEELIFNGFSLHISSGTTVALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINMKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEEATIEEIRSASELANAAKFINKLPQGLDTMVGDHGTQLSGGQKQRIALARAILKNPRILLLDEATSALDAKSERAVQDALDRIMVSRTTIVVAHRLSTIRNADMIAVIHRGKVVEKGTHFELLMDLEGAYSQLTRLQEVNTDHHRKSELSAESFRQSSQRMSLQRSISTGSSIGNSSRHSFSVSFDLPTRVNVAYPELESFPTKEKGLEVPLSRLASLNKPEIPVLIIGCLAAIGNGVIFPIFGVLMSSVIKTFYEPFDEMKKDSKFWAVMLMLLGLASLLVIPAQAYFFSVAGCKLIQRIRLICFKKVVNMEVGWFDEHENSSGAVGARFSVDAASLRSLIGDALGLLVQNFATALAGLFIAFDASWQLALIILALIPLVGLNGYIHMKFLKGFSADAKMMYEEASQVANDAVGSIRTVASFCSEDKVMELYRKKCEGSMKTGIRQGIISGTGFGVSFFLLFSGYATSFYAGARLVKAGDTTFSHVFRVFLALTMAAVGISQSSSFAPDSSKAKSATASIFEIIDKKSKIDPSDESGITLDRVKGEIELRHVSFKYPSRPNIQIFKDLSLTIHSGKTMALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRQLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGSNATEAEIIAASELANAHRFISSLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIMEKGRHETLVNVKDGFYASLVQLHTSAKTV 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03561 1279 CDD ABC_6TM_Pgp_ABCB1_D2_like 702 1017 - -
Mepo4g03561 1279 CDD ABC_MTABC3_MDL1_MDL2 385 623 - -
Mepo4g03561 1279 Gene3D - 375 624 IPR027417 -
Mepo4g03561 1279 FunFam ABC transporter B family member 1 692 1000 - -
Mepo4g03561 1279 ProSitePatterns ABC transporters family signature. 1174 1188 IPR017871 GO:0005524|GO:0016887
Mepo4g03561 1279 SUPERFAMILY ABC transporter transmembrane region 41 369 IPR036640 GO:0005524|GO:0016020
Mepo4g03561 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1272 IPR027417 -
Mepo4g03561 1279 CDD ABC_MTABC3_MDL1_MDL2 1034 1272 - -
Mepo4g03561 1279 Pfam ABC transporter 1053 1202 IPR003439 GO:0005524
Mepo4g03561 1279 FunFam ABC transporter B family member 1 375 624 - -
Mepo4g03561 1279 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 346 - -
Mepo4g03561 1279 Pfam ABC transporter 404 552 IPR003439 GO:0005524
Mepo4g03561 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1034 1271 IPR003439 GO:0005524
Mepo4g03561 1279 FunFam ABC transporter B family member 9 1001 1023 - -
Mepo4g03561 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 621 IPR003439 GO:0005524
Mepo4g03561 1279 FunFam ABC transporter B family member 9 48 381 - -
Mepo4g03561 1279 MobiDBLite consensus disorder prediction 1 37 - -
Mepo4g03561 1279 SUPERFAMILY ABC transporter transmembrane region 700 1018 IPR036640 GO:0005524|GO:0016020
Mepo4g03561 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 623 IPR027417 -
Mepo4g03561 1279 FunFam ABC transporter B family member 1 1024 1274 - -
Mepo4g03561 1279 ProSitePatterns ABC transporters family signature. 524 538 IPR017871 GO:0005524|GO:0016887
Mepo4g03561 1279 SMART AAA_5 1061 1254 IPR003593 GO:0016887
Mepo4g03561 1279 SMART AAA_5 412 598 IPR003593 GO:0016887
Mepo4g03561 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 713 999 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03561 1279 Pfam ABC transporter transmembrane region 712 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03561 1279 Pfam ABC transporter transmembrane region 61 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03561 1279 PANTHER ABC TRANSPORTER B FAMILY 23 625 IPR039421 -
Mepo4g03561 1279 Gene3D - 1024 1278 IPR027417 -
Mepo4g03561 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 350 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g03561 1279 Gene3D ABC transporter type 1, transmembrane domain 48 1003 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03561 Mepo-Chr4 45042868 45051338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03561 37 1278 Calmodulin-binding Proteins AT2G36910 44.382 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03561 K05658 - gmx:100800034 2036.54