Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03556 ATGCCTTCATCGACCGATACTAATAAAAGGTTGAAAAAAGGAATACTATGGTCAAAAGAAGAGGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCAGAAATTGGAAAGAGGTATCAAAGAACACAGGACTTGCACACTGTGGAAACAGTTGCCGTTTTAGATGGTGTAATACTCTACGACCTGATGTAAAAAAGGGTCCATTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATATTCTAAGTTTGGTGAGTTCAGATGGTCTATGATGGCTCTCGAGAACCAACCACCTATGGAGACTCAATATCAGATGTCAGAATCAATTTCTCCATATAAAAGTGGTTCATTGGAGTCTATGTCATATACACAAGAGAATTGGGAAGGCTTGGATGCTAGTTGCATGCACTCTCAGATAAATTTGGTTGATGAGAAAGGGAAGAAGCCGCCAATTTCTTCAGAGAACGATGTTGATGAAGCAAACCATGACGACATGATGAATCCAGAATTTTGGAATGACACGATTATCACATTATTCAATGAGGTTTACAGTAACTTGCATGACAAGCTTCCATGTGATGTTAATGATGCCTTAGGCAGCTGCATGACAATGCAATCAGATCTGCCTCCACTCCCACCACCTATGGAGACTCAATATCAGATGTCAGAGATAAATTCGGAAGAAGCCAATTTGGTTGATGAAAAAGGGAAGAAACTAATTTCTTCGGAGAACGATGTTGAAGCATACCATGATGACATAATGAATCCGAAACTTCGGATTGACATGATCAGCACATTAGTCGATGAGGTTGACAATAACTTGCATGACAAGCTTCCATACGATGTTAGTGATGCCTTAGACACCTGCATGACAACAATGCAATCAGATCTGCCTCCACTCCCATCATCTGTGGAGACTCGATATCAGATGTCAGAGATAAACAACTGGAAGAAGGCAATGGCTTTGGAGGAAGGTGTTGATGAAAACCAGATCATTTGGTTTGAGGATTACTTATACGATTATTTGGTTTGA 1038 0.3911 MPSSTDTNKRLKKGILWSKEEDEILKAYVEKHGTRNWKEVSKNTGLAHCGNSCRFRWCNTLRPDVKKGPFSKEEEEKFFELYSKFGEFRWSMMALENQPPMETQYQMSESISPYKSGSLESMSYTQENWEGLDASCMHSQINLVDEKGKKPPISSENDVDEANHDDMMNPEFWNDTIITLFNEVYSNLHDKLPCDVNDALGSCMTMQSDLPPLPPPMETQYQMSEINSEEANLVDEKGKKLISSENDVEAYHDDIMNPKLRIDMISTLVDEVDNNLHDKLPYDVSDALDTCMTTMQSDLPPLPSSVETRYQMSEINNWKKAMALEEGVDENQIIWFEDYLYDYLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03556 345 ProSiteProfiles Myb-like domain profile. 17 61 IPR001005 -
Mepo4g03556 345 SMART sant 13 63 IPR001005 -
Mepo4g03556 345 SMART sant 66 113 IPR001005 -
Mepo4g03556 345 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 95 - -
Mepo4g03556 345 ProSiteProfiles Myb-like domain profile. 62 94 IPR001005 -
Mepo4g03556 345 SUPERFAMILY Homeodomain-like 17 91 IPR009057 -
Mepo4g03556 345 Gene3D - 16 66 - -
Mepo4g03556 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 65 IPR017930 -
Mepo4g03556 345 Pfam Myb-like DNA-binding domain 17 77 - -
Mepo4g03556 345 CDD SANT 17 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03556 Mepo-Chr4 44984865 44986950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03556 11 96 MYB Transcription Factor Family AT5G55020 52.326 1.07e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g03556 Myb_DNA-bind_6 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03556 K09422 - mtr:25484743 366.696