Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03552 ATGCATGAAAGGAAGCTTTTGCAGTCTAAGTCTTCAGTAAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTAAACGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTTAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTGCTGTTCACAATGACAACATTATGCTGATTGGTGACGGAATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTATACCACTTATAGCTCTGCAACAGCAGGCATTGATGGACTTCATTTCATTGCACGTGACATAACCTTCCAAAATACTGCTGGTCCTCACAAAGGTCAAGCTGTGGCGCTCCGATCAGCTTCAGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGCTATCAAGACACTCTGATGGCTCATGCACAACGTCAATTCTACCGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAACGCTGCAGTGGTATTCCAAAATTGTAACATTTTTGCAAGAAAGCCTTTGGATGGCCAAGCTAACATGATCACTGCCCAAGGTCGTGGTGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGATAAGTATAAAACCTTCTTGGGCAGGCCATGGCAACAATACTCAAGAGTCATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCCTAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAATAGAGTAAAATGGCCTGGTTATCATGTGATAACAAACCCAAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGACCAACATGGTTGGCTAGCACTACTGTGCCATTTACATCTGGTCTTTGA 990 0.4232 MHERKLLQSKSSVKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYKENIEVAVHNDNIMLIGDGMQNTIITSSRSVQGGYTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHVITNPNEASKFTVAGLLAGPTWLASTTVPFTSGL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03552 329 SUPERFAMILY Pectin lyase-like 13 328 IPR011050 -
Mepo4g03552 329 Gene3D - 10 329 IPR012334 -
Mepo4g03552 329 Pfam Pectinesterase 16 314 IPR000070 GO:0030599|GO:0042545
Mepo4g03552 329 PANTHER PECTINESTERASE 7 319 - -
Mepo4g03552 329 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Mepo4g03552 329 FunFam Pectinesterase 10 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03552 Mepo-Chr4 44936614 44938065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03552 3 329 Carbohydrate Esterase AT5G51500 65.957 1.39e-160 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03552 K01051 - gmx:100806133 593.578