Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03549 ATGGGAAGGCACTCATGTTGTTACAAGCAAAAGCTTAGGAAGGGACTATGGTCACCAGAAGAAGATGAAAAACTACTGAGGCATATAACAAAGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGTTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCTCATTGTTGAACTTCATGCAGTACTAGGGAATAGATGGTCTCAAATAGCGGCGCAATTGCCGGGGAGGACAGACAATGAAATAAAGAATCTATGGAACTCTTGTTTGAAGAAGAGATTGAGGCAAAAAGGTATAGATCCTGTGACTCATAAACCATTATCTGAGGTTGAGAATAATGGAGAGGAAAATGCTAAGAAGAGTCAAGAGAAAGCACCAGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAGAGAACAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGGTTCATTCAACCCTCAGATTTGATGGGAAATTTTCCACTTCAGATGAGTTATGCAAATACTGAAAATGATTGTTTACCAAATGATTCAAACACTAGTAGTAACCATTGGTTCAACCAAACTGGAAAAACTTTTGATATGAATTCTGATCAGTTTCATTTCAATCCCACAACACCAACAACCATGTTTCTTCCTAATTCTTTTTGCTGCAACAATTCTCTTGATATTCCCTCTGACAATGTTTCCACAGAGATGAAAACTAGCAGCAGCAGCACCTTAAACTTACATAACAACAGTTATTCTTCTTGGGGAGGATTGATGGAAAATCATACAGAAGAAGCTAAGTGGGATAATAACAATAACTACTTTCAAAACCCTATCTTAATGCTTGCTTCTGAATCTTTATGCAATGAGATAAAGCCTCCATTGATGAACTTTGTACCTGATAGTTTGGGAGCTATTTTACCTCATACAAACCAAGAACAAGAACAATCACAAACAACTTCAAATATCTTTTCCAAGGACATTCAGAAACTCAGAGAAGCTTTTGGAGATATGTGA 1161 0.3686 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKGIDPVTHKPLSEVENNGEENAKKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTTSSISPKAYAMEMEGSCNKEFFIDRFIQPSDLMGNFPLQMSYANTENDCLPNDSNTSSNHWFNQTGKTFDMNSDQFHFNPTTPTTMFLPNSFCCNNSLDIPSDNVSTEMKTSSSSTLNLHNNSYSSWGGLMENHTEEAKWDNNNNYFQNPILMLASESLCNEIKPPLMNFVPDSLGAILPHTNQEQEQSQTTSNIFSKDIQKLREAFGDM 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03549 386 MobiDBLite consensus disorder prediction 123 145 - -
Mepo4g03549 386 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo4g03549 386 Gene3D - 68 148 - -
Mepo4g03549 386 Gene3D - 11 67 - -
Mepo4g03549 386 MobiDBLite consensus disorder prediction 123 147 - -
Mepo4g03549 386 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo4g03549 386 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo4g03549 386 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo4g03549 386 SMART sant 13 63 IPR001005 -
Mepo4g03549 386 SMART sant 66 114 IPR001005 -
Mepo4g03549 386 FunFam Myb transcription factor 11 67 - -
Mepo4g03549 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo4g03549 386 CDD SANT 17 61 IPR001005 -
Mepo4g03549 386 FunFam MYB transcription factor 68 140 - -
Mepo4g03549 386 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo4g03549 386 CDD SANT 69 109 IPR001005 -
Mepo4g03549 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo4g03549 386 PANTHER MYB DOMAIN PROTEIN 55 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03549 Mepo-Chr4 44895629 44897350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03549 1 152 MYB Transcription Factor Family AT4G01680 84.211 8.21e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g03549 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03549 K09422 - gmx:100815881 493.041