Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03545 ATGAAGAATAATATGTATTCTTCTTCATCTCCTTCTCATTCTCATGATCATTCTTTCCATCAAAAACCAAAAACCAATAATCAGTCTCTTCAAAAAGCCAGATACCCGTCTTTCTCTTTCGTTGAGTCCTCAACAACTAATGATGTCGAAAAGAATAATACTGAGAAGAAGATCATATGGTGTTTTTCTTATTCTGTTGCTCATAATCATAATGATGTTCTAAAACAAAATAAACACTCATGTGATGTTTGCAACAAGGTTTTTACTTCTAACAAAGCATTGAATGCACATATGAGATGTCACGGTCAAAACGGTCCAACAGTTGCAGCACCATCTTCAGAGAAACAGCAGCCGTGCAGGAGAAGAAGATATATGAATATAGACGACGACGATGATGATGTTATTGAAACAGCTGCAGAAACTCTATTGCAACTATCTCGCATGGGTTATGAGGATGTGAATCACCGTGGTGCTAAAAGGCAAAAGCTTTCTTGCAATATGATGGATGATAATGAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGGAACAAGGTGTGCTACTAACAAGTGGCGGTCATGATATTGAAGAGAAGAAGAAGATTAATGAAGGTGAAACTGAATTAGGGTCAAAAGTTGTGAAGAATTTTGATTTGAACGAGCTTACAAGTGATGATGTTGTGAAGAATTTTGATTTGAACGAGCTTCCAAGTGATGATAATGAAGGCGAAACTGAATTAGGGTCAAAAGTTGTGAAGAATTTTGATTTGAACGAGCTTCCAAGTGATGAGTTTGAAGATGAAACCAATTAG 810 0.3617 MKNNMYSSSSPSHSHDHSFHQKPKTNNQSLQKARYPSFSFVESSTTNDVEKNNTEKKIIWCFSYSVAHNHNDVLKQNKHSCDVCNKVFTSNKALNAHMRCHGQNGPTVAAPSSEKQQPCRRRRYMNIDDDDDDVIETAAETLLQLSRMGYEDVNHRGAKRQKLSCNMMDDNEKKKKKKKKKKEQGVLLTSGGHDIEEKKKINEGETELGSKVVKNFDLNELTSDDVVKNFDLNELPSDDNEGETELGSKVVKNFDLNELPSDEFEDETN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03545 269 MobiDBLite consensus disorder prediction 1 31 - -
Mepo4g03545 269 MobiDBLite consensus disorder prediction 232 269 - -
Mepo4g03545 269 SUPERFAMILY beta-beta-alpha zinc fingers 76 106 IPR036236 -
Mepo4g03545 269 Gene3D Classic Zinc Finger 55 138 - -
Mepo4g03545 269 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Mepo4g03545 269 Pfam C2H2-type zinc finger 79 101 - -
Mepo4g03545 269 SMART c2h2final6 79 101 IPR013087 -
Mepo4g03545 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03545 20 154 C2H2 Transcription Factor Family AT5G04390 28.671 7.46e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g03545 zf-C2H2_6 7.9e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03545 - K09228 psat:127104274 60.8474