Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03540 ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTAGTGCCATTCAATGGTAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGACATTCTTTTTGTTATGTGAGACCAACTATGTTTGAATCTCCTGCTATTAGTCCGTCGAATTCCGAGAGGTTTACGGTTGATTCAAGTACTCTTGATTCTGAAACCTTGAGTGGATCGTTTAGGCATGATAGTATGGAGCATTCTAATTCTTCTGGTTTACACAAGCAGGGTAAGAATTTCCCTGAAACTACGTTTAAGACGATTTCGGGGGCTTCTGTTAGTGCTAATGTCTCAACAGCAAGGACAGGTGGTGGTAACCAGAGTGCTTTATTTGCTGGTGATTTCTTGGAACCTGCTGCATCGTTTGAGGGAACTGCCTCATTTGCTGCAATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTCTGAATGGTTTTATGTCTGGTCCTTTGGAGAGGGGCTTTGCCTCGGGTCCATTGGATAGAAGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGGGTTATGTCAGGTCCTCTTGATGACACTGATAAATCCAACTTTTCGGCACCACTTGCACGTGGTCGTAGGAGGCCGCGTCTACAACATCTCATGAGAAGTGTTAGTGGACCGGTGAAGAACACGTTTTCTCGAACGTTCTCTAAGCACTCCATGGGTGGAAGTTGGATGCAAAGGTTGTTCTTTCAACCGGTTACTCAATTGGCATGGCCTTCCAGAGATACGAAGTGTAGGCCGGACATCTCTAGGAACTGTGGTATTGATGTTGGACCGTATGAAGCTGAGTATAAACACACGCATAATCTGCAGTGGGCTCAGGGAAAGGCTGGTGAAGATAGGGTTCATGTAGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATCCCCTTAAACCCGAAGTCCCTGAAACTGTAAAAGCCGCCGTTGCTCCAGAATGCAGTCGGTCGGAAATGTCTGATACTCATACTAATTCTAATCAAGAATGTTTTGAAGCTTGTTCTGGTCCTGAATTAATTAAGGATCAATCATTTAACAATGAGATAGTTGAGGAAAAGGCTGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAACTTGTCTGCTGTTTCTAATTCTGTTCAACATGAAAAGTTGACTGGAAAAGGTAAAAGAAGTTTAAGGCTTTATGAGCTACTTCAAATGGAATCTTGGGATGATCAATGTAATGATTCCTCAGTTCCGACGGAGTCAAAACTAGATGAGCATACAAGACCTTGCTCGTCTACTGTAAGAGAAGATAGCTCTAAACATCAGGATGAAGGCCCGTCTACATCAGGGGAAAATGGAAGCCCTGGGTTTGGTTCAACCAACAAGGAGCACGAAGCTGTTTTTCCTGCTTCTGTATCAAGGCAGAATTCGAAAAAGTCATTTATCGGTGCAAAAATTAAAAAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAAGAAAGTAGTGTTGATGAGAAAATATTAGAAGCCTCGGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAACGCAGTTTTAACAGCAATGGCTCGAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAACGGCGGAGAATAATCTGGACAAAAATCCAGAACTTGCTATAATGGGATCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGCCATCCTAATTCAAGCTCTGTCAAGGATGACGTGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTCGATAGAATTTCAGAGGAGTCTCCAATTCACAACCATAACAATCATGTTATCAAGATGAATAAAAACCGTGAGATATCATTTTGTAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGACCACAGCACCAGTATTGAAGAGGAAGTTACAAGAATAAGAGCAGAACACCCTGATGATAGTCAGGCCATATTGAATGATCGAGTGAAAGGACATTTAAAAGTTACCAGAGCATTTGGCGCCGGGTTCTTGAAGAGGCCGTCTTTTAATGAAGCTCTACTCGAGGTGTTTCAAGTTAAATATATCGGCCAGGCTCCTTACCTAAGTTGCACTCCTTCTATACTTCACCATCGACTTTCTTCAAGTGATCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAAGTGGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGCGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCTGTGCTGCTAAAAAGAATGGAATGGACTTTCATGAACTGCTTGATATTCCTCACGGAGATCGGCGTAAATATCATGATGATGTATCTGTCATGGTCGTTTCTTTGGAAGGAAGGATTTGGAGATCATCGGGATAA 2679 0.4203 MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSNSSGLHKQGKNFPETTFKTISGASVSANVSTARTGGGNQSALFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQHLMRSVSGPVKNTFSRTFSKHSMGGSWMQRLFFQPVTQLAWPSRDTKCRPDISRNCGIDVGPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDPLKPEVPETVKAAVAPECSRSEMSDTHTNSNQECFEACSGPELIKDQSFNNEIVEEKAEVNVNVEHQLSNCGSNLSAVSNSVQHEKLTGKGKRSLRLYELLQMESWDDQCNDSSVPTESKLDEHTRPCSSTVREDSSKHQDEGPSTSGENGSPGFGSTNKEHEAVFPASVSRQNSKKSFIGAKIKKMYRKPKSLCKKLFPWSYDWHREESSVDEKILEASGPIRKCRSGVDHNAVLTAMARALERTEEAYMETAENNLDKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSSSVKDDVRHRNRSRESLVRMELDRISEESPIHNHNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVTRIRAEHPDDSQAILNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVKYIGQAPYLSCTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03540 892 Gene3D - 451 889 IPR036457 -
Mepo4g03540 892 MobiDBLite consensus disorder prediction 69 95 - -
Mepo4g03540 892 MobiDBLite consensus disorder prediction 649 671 - -
Mepo4g03540 892 SMART PP2C_4 282 881 IPR001932 -
Mepo4g03540 892 SUPERFAMILY PP2C-like 294 884 IPR036457 -
Mepo4g03540 892 MobiDBLite consensus disorder prediction 462 514 - -
Mepo4g03540 892 Gene3D - 277 441 IPR036457 -
Mepo4g03540 892 ProSiteProfiles PPM-type phosphatase domain profile. 282 883 IPR001932 -
Mepo4g03540 892 MobiDBLite consensus disorder prediction 471 496 - -
Mepo4g03540 892 MobiDBLite consensus disorder prediction 497 511 - -
Mepo4g03540 892 CDD PP2Cc 589 883 IPR001932 -
Mepo4g03540 892 Pfam Protein phosphatase 2C 601 653 IPR001932 -
Mepo4g03540 892 Pfam Protein phosphatase 2C 715 831 IPR001932 -
Mepo4g03540 892 PANTHER PROTEIN PHOSPHATASE 2C 286 882 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03540 Mepo-Chr4 44832558 44839104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03540 1 892 PP2C-type Phosphatase Gene Family AT2G46920 62.959 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03540 - - pcin:129315875 1379.77