Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03530 ATGTCAGCTCAAAAAGGAAGCATGGACAGTGGAGCTTCAAGGAAACGTATGAAACCTGGGGTACAAGAAAAGATTGGAGATGAAGCAGAATCGCAGATTGTGCTTGTACAGGAGGAAGGGTTTGAGACTAACCAAGTTGGGTCTGAAGAAATGGAGCTCAATATTTCTCTTGTTCTTGAGAAGATTGAGAATTTTACTCAGAGGGTATCTGAGCTCTTGGAATCAGGGAAAACAATGTTTAAGGAGCTATGCAATGAATTTGAAGAGAAACTGATTATGATCCACAAGGAGCAGGTTGAAAAATGGCAGGAAGAAATCAAAGAACTTCGAGCAACCGATGCCTCAAATGAGGAAGCCAATGCTCTTCTGCAAAATGCTCGATATGTACTTCAGCTCACTCGGGGTGCATGTGGATATGAAAATCTGTACAAAGATGGTTATGGAATAAAAACAGCTGCATTGAGTACTGCTTTGTTTAATGATGGCAAGTCGTGTGGTGGTTGCTATCGGATTGTTTGTGATGCAAGTCAAGTTCCCCAATGGTGTCTCTGGGGAACTTCCATAACAATTACAGCCACTAATTTTTGTCCCCCAAACTTTGCTCTCCCAAGTAACAATGGTGGTTGGTGTAATCCTCCTAGACCACATTTTGACATGTCACAACCTGCTTTTCAAATGATCGCCAAATATAAGGCTGGGATTGTTCCAATCCTTTACAGAAAAGTTGGGTACAAAAGAAGTGGAGGCATAAGGTTTACAATCAATGGGAGAGACTATTTTGAACTAGTGCTTATAAGCAATGTAGGGGGAGCAGGAGATATCTCCAAAGTTTGGATCAAAGGTTCTAAAATGAGAAGCTGGGAAACTATGTCAAGGAATTGGGGTGCTAACTGGCAAAGCTTAAGCTATCTGAAAGGTCAGAGCCTGTCCTTCAGAATTCAACTCACTAATGGAAAGACTCGTACAGCTATTAATGTGGCACCGTCTAGTTGGAGATTTGGTCAGTCTTTCATCAGCAAGCTAGCTATTCTCTTTTCTAATCGTAAAAAGAAAAAAGCTGCTTCTTCTATTCCTTCAAGGCTTAACCAATGTCAGCTCAAAAGCGACAGTGGAGCTTCAAGGAAAAGTATGAAACCTGGGGTACCAGAAAAGACTGGAGTTGAAGCAGAATCGCAGATTGTACTTGTACAGTTGGAAGGATTTGAGACTAACCAAATTGGGTCTGAAGAAATGGAACTCAATATTTCTCTTGTTCTTGAGAAAATTGAGAATTTTACTGAGAGTAGCAATACATAG 1296 0.409 MSAQKGSMDSGASRKRMKPGVQEKIGDEAESQIVLVQEEGFETNQVGSEEMELNISLVLEKIENFTQRVSELLESGKTMFKELCNEFEEKLIMIHKEQVEKWQEEIKELRATDASNEEANALLQNARYVLQLTRGACGYENLYKDGYGIKTAALSTALFNDGKSCGGCYRIVCDASQVPQWCLWGTSITITATNFCPPNFALPSNNGGWCNPPRPHFDMSQPAFQMIAKYKAGIVPILYRKVGYKRSGGIRFTINGRDYFELVLISNVGGAGDISKVWIKGSKMRSWETMSRNWGANWQSLSYLKGQSLSFRIQLTNGKTRTAINVAPSSWRFGQSFISKLAILFSNRKKKKAASSIPSRLNQCQLKSDSGASRKSMKPGVPEKTGVEAESQIVLVQLEGFETNQIGSEEMELNISLVLEKIENFTESSNT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03530 431 SUPERFAMILY Barwin-like endoglucanases 132 267 IPR036908 -
Mepo4g03530 431 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 259 339 IPR007117 -
Mepo4g03530 431 FunFam Expansin 249 342 - -
Mepo4g03530 431 PANTHER EXPANSIN-A15 107 339 IPR002963 GO:0009664
Mepo4g03530 431 Pfam Expansin C-terminal domain 250 328 IPR007117 -
Mepo4g03530 431 Gene3D - 94 243 IPR036908 -
Mepo4g03530 431 Gene3D - 249 343 IPR036749 -
Mepo4g03530 431 SMART dpbb_1 151 239 IPR007112 -
Mepo4g03530 431 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 134 249 IPR007112 -
Mepo4g03530 431 Coils Coil 85 119 - -
Mepo4g03530 431 MobiDBLite consensus disorder prediction 1 23 - -
Mepo4g03530 431 PRINTS Expansin/Lol pI family signature 325 339 IPR007118 GO:0005576
Mepo4g03530 431 PRINTS Expansin/Lol pI family signature 287 301 IPR007118 GO:0005576
Mepo4g03530 431 PRINTS Expansin/Lol pI family signature 155 173 IPR007118 GO:0005576
Mepo4g03530 431 PRINTS Expansin/Lol pI family signature 133 151 IPR007118 GO:0005576
Mepo4g03530 431 PRINTS Expansin/Lol pI family signature 232 248 IPR007118 GO:0005576
Mepo4g03530 431 SUPERFAMILY PHL pollen allergen 246 339 IPR036749 -
Mepo4g03530 431 PRINTS Expansin signature 175 186 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 325 341 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 146 160 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 207 224 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 188 198 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 224 237 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 260 281 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 296 317 IPR002963 GO:0009664
Mepo4g03530 431 PRINTS Expansin signature 248 260 IPR002963 GO:0009664
Mepo4g03530 431 Pfam Lytic transglycolase 151 239 IPR009009 -
Mepo4g03530 431 CDD DPBB_EXPA_N 135 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03530 Mepo-Chr4 44772665 44784740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03530 135 341 Expansin Gene Family AT4G01630 77.778 4.86e-123 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03530 - - gmx:100813434 401.364