Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03513 ATGCCACTTTATGAGTTATACCGTTTGGCAAGAGAGAAGCTTGATAATGAGACTAACGGCGCAAGTGTAGCGGATCAACCTTCGTCGCCTGAGAATGATTTTTTTGAGCTGGTTTGGGAGAGTGGTCAGATTTCAAGCCAAGGTCAATCAAGTAGAGGTAGAAAGAGTCCATCTTGTAGGAGTTTGCCATCTCACTGTTTACCATCTCATAGTCCTAGAGGTCGAGATAAAGATGTAGGAGGAGGATTTAGTAACAACAATCCAAAGATAGGAAAGTTTGGTGATTTAGACTCTGGATTGAATGAGATTCCAATGTCGGTGCCATCTCGCGAAGTAGATGAAATGATGCCTTGGTTGGATTATTCAATGGATGGCTCTTTGCAACATGAATATGGTTCTGATTTCTTTCATGAACTCACGGAGAACGACCTTCCTGCCTCGAATAGTTTTACTCTATTGGATAAAAGAAGTAATGGGAATCAGATATTTAGGGACTCTCATAAAAATTCTGCAGAACCAATGAATGTTTCTAAGGGTTCTTCAGCTGAACAGGTTGTTGAGACTGCAAGACATAAAGCTAGTGCCAGTCAGTTATATCCTCCATCATCGAATCAATGTCAAACAACATCTGTAACTGTTAGATCTAGGGCATCGGATATAACCGAAAATAATAATGTTAGTAGTGGTAACCAGGACGTGCCTTATGGGGATATTACTCGCATTCCATCTTCCTCGAGCGATTTTTCTAGCTTAAAAGCGCAGAAGCAAGATCCTATAATGCCTGGCAATGGTTCCAGTGTAATGAATTTTTCCCATTTTGCAAGGCCTGCAGCTATTGTGAGAGCTAATCTTCAGAACATTGGCTTGAAGTCTGGTTTGAATTCAGCTTCAGCAAGATCAGATATTATGGGAGTTAAGAATAAAGGTGCTGCTTCGACTAGCAGCAATCCTCCTGACTCAACTCTTGTTAATCCAAGCGATGAGTGTTCAAAGGAACCGGAAATGCGCTGTCATAAGGTGGTAGAGCCATCCAAGGCTGATTTGAAACCTTTGCAGACGAAATCACTTGAACCGAATGCTGTAGCTACTAAACAATCAAAGCCTGCTAACAAAGAGAATGGAATTAAGAATGATCAACCTTCCATTCAAGTTCTTGGTGACATTGGTGCTAAAGGACACACAGCTGCTGAAAAAGGCATGGAGGTGGCGGTAGCCTCTTCTTCTGTTTGCTCTGGCAATGGTGCAGACAGAGGCTCGGATGATCCAAATCGAGATTTGAAACGGAAAAGTAGAGACACTGAGGACTCTGAATGCCATAGTGAAGATGTTGAGGATGAATCAGTGGGAGTTAAAAAAGGAGCGGCTGGACGAGGAGTTGCAGGTTCCAAAAGAAGCCGTGCTGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATAAATGAGAAGATGCGTGCATTGCAAGAACTCATACCTAATTGCAATAAGGTGGATAAAGCTTCTATGCTGGATGAGGCAATTGAGTATCTAAAAACACTTCAGCTCCAAGTTCAAATGATGTCGATGGGAGCTGGTTTATATATGCCTCAAATGATGTTACCTGCTGGAATTCAGCACATGCATGCACCACACATGGCTGCATTTTCACAGATGGGCGTTGGCATGCATATGGGGTTAGGTATGGGTTATGGAATGGGAATGCCTGACATGAGCGGCGGGCCGTCTAGATTTCCAATGATTCAAGTGCCTCAGATGCAAGGAAATCATATACCCGTTGCACATATGTCTGGACCCTCTGCTATGCATGGGATGGCCAGATCGAATACTCAAGGGTTTGGACTTCCGGGACAGGGAATTTCCATGCCAATGCCGCATGCTCCGGTATTTCCTTTTTCAGGAGGGCCTCTTATGAACTCATCCGCTCCGGGTCCGTCTGTGTATGGATCCACAGGACATGTTGAAGCTGTGAATCCGGCTTCAGCGTGTGGCTCAAAAGATCGAAGGCCAGATGTGGACTCGCAAATTAAGCAAAACACTGCTGGTCGTGACTCTACAAGCCAGGTCCCTAACCAGTCAACTTTGGTGCATAATGGTGGCCATGCTTCAGTGGCTGATGACAGTGAAGCTGCTAATCCTGGCAATATAACTTTGTGA 2160 0.4426 MPLYELYRLAREKLDNETNGASVADQPSSPENDFFELVWESGQISSQGQSSRGRKSPSCRSLPSHCLPSHSPRGRDKDVGGGFSNNNPKIGKFGDLDSGLNEIPMSVPSREVDEMMPWLDYSMDGSLQHEYGSDFFHELTENDLPASNSFTLLDKRSNGNQIFRDSHKNSAEPMNVSKGSSAEQVVETARHKASASQLYPPSSNQCQTTSVTVRSRASDITENNNVSSGNQDVPYGDITRIPSSSSDFSSLKAQKQDPIMPGNGSSVMNFSHFARPAAIVRANLQNIGLKSGLNSASARSDIMGVKNKGAASTSSNPPDSTLVNPSDECSKEPEMRCHKVVEPSKADLKPLQTKSLEPNAVATKQSKPANKENGIKNDQPSIQVLGDIGAKGHTAAEKGMEVAVASSSVCSGNGADRGSDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQMMLPAGIQHMHAPHMAAFSQMGVGMHMGLGMGYGMGMPDMSGGPSRFPMIQVPQMQGNHIPVAHMSGPSAMHGMARSNTQGFGLPGQGISMPMPHAPVFPFSGGPLMNSSAPGPSVYGSTGHVEAVNPASACGSKDRRPDVDSQIKQNTAGRDSTSQVPNQSTLVHNGGHASVADDSEAANPGNITL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03513 719 SMART finulus 472 521 IPR011598 GO:0046983
Mepo4g03513 719 MobiDBLite consensus disorder prediction 659 719 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 356 380 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 407 475 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 418 451 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 307 382 - -
Mepo4g03513 719 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 463 527 IPR036638 GO:0046983
Mepo4g03513 719 CDD bHLH_AtPIF_like 466 528 IPR047265 -
Mepo4g03513 719 FunFam Basic helix-loop-helix transcription factor 461 524 - -
Mepo4g03513 719 Pfam Helix-loop-helix DNA-binding domain 470 516 IPR011598 GO:0046983
Mepo4g03513 719 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Mepo4g03513 719 Gene3D - 461 524 IPR036638 GO:0046983
Mepo4g03513 719 PANTHER TRANSCRIPTION FACTOR PIF3 1 689 IPR044273 GO:0003700|GO:0006355
Mepo4g03513 719 MobiDBLite consensus disorder prediction 307 327 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 329 345 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 45 97 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 45 65 - -
Mepo4g03513 719 MobiDBLite consensus disorder prediction 676 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03513 Mepo-Chr4 44588079 44591672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03513 401 595 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 59.000 1.21e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g03513 HLH 7.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03513 K12126 - gmx:100794974 952.584