Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03496 ATGTATTGTATGCCTTCCCGTTTTGCTTCGACAACCTCTGTTCTCCGGGGCGCCGCCGTTCTGCGCGACGACGCCGTACCAATTCCTTTCTACGCTCGCATTAAGTTATATATAGTTGATCATTGTAGAGTAGAGGAGAAAATGCCAATGAAAAAGTACTATTGTGAGTATTGTGATAAGCAATTTCAAGATACACCCTTAGACCGGAAACGCCACTCTGCCGGTATTCAACACAAACAAGCCAAAGCTCGTTGGTACGATTCCTTCAAACCCGAACACCACAACCCTATTCCACCACCATCTAATCAACCCTTCTGCATCCACTTCGTCAACACGGGATTTTGTCGTTACGGCGATTCTTGCAAATATTTTCATCCCAATACACAACAACCAATAACAATAACACCAGGGAACATTGTAGGAGATACCATGGGAGTGCCATTCGGCAATTTGCCTCCGTCATTGCAGCCTCCGCCTGAGGGTGGATACTCCAACCTCCCCTTTCTCGATTGGGGATAG 519 0.4663 MYCMPSRFASTTSVLRGAAVLRDDAVPIPFYARIKLYIVDHCRVEEKMPMKKYYCEYCDKQFQDTPLDRKRHSAGIQHKQAKARWYDSFKPEHHNPIPPPSNQPFCIHFVNTGFCRYGDSCKYFHPNTQQPITITPGNIVGDTMGVPFGNLPPSLQPPPEGGYSNLPFLDWG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03496 172 SUPERFAMILY CCCH zinc finger 103 128 IPR036855 GO:0046872
Mepo4g03496 172 SMART c3hfinal6 101 127 IPR000571 GO:0046872
Mepo4g03496 172 SUPERFAMILY beta-beta-alpha zinc fingers 50 95 IPR036236 -
Mepo4g03496 172 ProSiteProfiles Zinc finger C3H1-type profile. 100 128 IPR000571 GO:0046872
Mepo4g03496 172 Gene3D - 94 144 - -
Mepo4g03496 172 Gene3D Classic Zinc Finger 50 93 - -
Mepo4g03496 172 PANTHER NUCLEASE-RELATED 48 172 - -
Mepo4g03496 172 Pfam U1 zinc finger 50 86 IPR013085 GO:0008270
Mepo4g03496 172 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 106 126 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo4g03496 zf-U1 1.5e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03496 K13152 - gmx:100527203 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03496 4 44349570 44350680 Mepo4g03496 4 44349570 44350680 ECH