Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03487 ATGGCACCCAAATCCCAAACCCGTTCTTCCTCCGCCGCCTCCGAATTCTTCAAACCCGGCACCTTAGTCGAAATCAGCTCCGACGACGACGGTTTCCGCGGCTCATGGTTCACCGGCAAGATCGTCCGCCGTCTCGCCAACAACAAGTTCATGGTCGAGTACGACAACTTGATGGAAGATGAAGCAGGTACAAAGCGCCTCAAAGAATCGCTCAAGCTTCACCAGCTCCGACCAGTTCTTCCGACGGAGGCTAACCGGGTGTTCAAATTCGGCGATGAAGTTGATGCGTATCACAATGATGGATGGTGGGAGGGTCACATTACTGAGGAATTGGAAGATGGAAGATTCGCGGTGTATTTTAGAGTCTCCAAGGAGCAGATCGTGTTCAACAAGGAGGAACTCAGACTTCACCGTGAATGGATGCATGAGAAATGGGTCCCACCTTTTCAACAACAGGATGATAGTGACATTGAGAAAAAGGTGACGGTGAAGGTTGATGAAACTGTGACGGAAGAGAATGTGAATTTTGAGGTTAAGCCAGGGACATTGGTTGAGGTTTGCAGTGATGAAGAGGGTTTTAAAGGAGCTTGGTTTTGTGGCACACTTGTTGAGGTGAAGGGAGAAGGTAAGTTCGTTGTCGAGTACGATAGCCTGCTGGATGAGGATTCAAGTCTCCTGAGAGAGGATGTTGATATCCTGCAAATGAGGCCTCGTCCACCAAAAACTGCTGAAGTTGCTCAGTTTGAAGTTCTTGATGAAGTTGATGCTTATTATAATGACGGGTGGTGGGTTGGTGTTGTTTCAAAAGTTCTTGGGGACTCCAAGTATATTGTTTTTTTCAGGAACTCCAATGAGGAAATTGAGTTTCAGCATTCCCAGTTGAGGCTGCATCAGGACTGGATGAATGGCAAATGGGTCATGGTTTCGAAGGCGTTGGTGTTGAGGTTTTGA 951 0.4763 MAPKSQTRSSSAASEFFKPGTLVEISSDDDGFRGSWFTGKIVRRLANNKFMVEYDNLMEDEAGTKRLKESLKLHQLRPVLPTEANRVFKFGDEVDAYHNDGWWEGHITEELEDGRFAVYFRVSKEQIVFNKEELRLHREWMHEKWVPPFQQQDDSDIEKKVTVKVDETVTEENVNFEVKPGTLVEVCSDEEGFKGAWFCGTLVEVKGEGKFVVEYDSLLDEDSSLLREDVDILQMRPRPPKTAEVAQFEVLDEVDAYYNDGWWVGVVSKVLGDSKYIVFFRNSNEEIEFQHSQLRLHQDWMNGKWVMVSKALVLRF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03487 316 Pfam Agenet domain 181 240 IPR008395 -
Mepo4g03487 316 Pfam Agenet domain 20 81 IPR008395 -
Mepo4g03487 316 CDD Tudor_Agenet_AtDUF_rpt2_4 250 296 - -
Mepo4g03487 316 Gene3D - 163 248 - -
Mepo4g03487 316 SMART agenet_At_2 15 84 IPR014002 -
Mepo4g03487 316 SMART agenet_At_2 176 243 IPR014002 -
Mepo4g03487 316 SMART agenet_At_2 86 142 IPR014002 -
Mepo4g03487 316 SMART agenet_At_2 246 302 IPR014002 -
Mepo4g03487 316 CDD Tudor_Agenet_AtDUF_rpt2_4 91 136 - -
Mepo4g03487 316 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 178 310 - -
Mepo4g03487 316 CDD Tudor_Agenet_AtDUF_rpt1_3 179 240 - -
Mepo4g03487 316 CDD Tudor_Agenet_AtDUF_rpt1_3 17 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03487 Mepo-Chr4 44257411 44260789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03487 188 300 PHD Transcription Factor Family AT5G58610 31.852 1.84e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03487 - - vum:124823040 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03487 4 44257411 44260789 Mepo4g03487 4 44257411 44260789 ECH