Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03485 ATGGCGACCAGATCCAGAACCCGTGCTTCTTCCTCTGCCGCCGCGGCCACCGCATGCACTTCCAAACCAATTCAACCGGATGAAAATGAAATCAAGAAAAAGGTGTTGGTGAAAGCCGATGAAACAGTGACCTTAGAGAAAGATGGTTTTCACTTTGTGGTAGGAGCATTGGTTGAGGTGTGTGGTGATGAAAAAGGTCTCAGAGGGGCTTGGTTTCTTGGCACCATTGTTGAATTAAAGCGGCATTTTAGGTTTGTTGTCGAGTACGAGGCCCTGGTCGATGATGATTCTAAGCCTTTGAGGGAGGAATTGGATATCCGCCATATTAGGCCCCGTCCTCCAAAGACTGATGATGTTGCTGAGTTCAAATTTTTCGACGAAGTTGATGCTTTTTACAATGATGGTTGGTGGGTTGGTATTGTTACTAAAGTTCTTGGGGACTCCAAGTATGTTGTGTTTTTCAGGAGCTTCAAGGAAGAGATGGAGTTTCATCATTCTCAGTTGAGGCTGCATCAGGATTGGATGGATCGCAGATGGGTCATGGCTTCTAAGCTTATAGCACAAGCCCTTATGTATGAGCTTGCGTAA 588 0.4575 MATRSRTRASSSAAAATACTSKPIQPDENEIKKKVLVKADETVTLEKDGFHFVVGALVEVCGDEKGLRGAWFLGTIVELKRHFRFVVEYEALVDDDSKPLREELDIRHIRPRPPKTDDVAEFKFFDEVDAFYNDGWWVGIVTKVLGDSKYVVFFRSFKEEMEFHHSQLRLHQDWMDRRWVMASKLIAQALMYELA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03485 195 CDD Tudor_Agenet_AtDUF_rpt2_4 126 170 - -
Mepo4g03485 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Mepo4g03485 195 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g03485 195 CDD Tudor_Agenet_AtDUF_rpt1_3 52 114 - -
Mepo4g03485 195 Pfam Agenet domain 55 114 IPR008395 -
Mepo4g03485 195 SMART agenet_At_2 120 176 IPR014002 -
Mepo4g03485 195 SMART agenet_At_2 50 117 IPR014002 -
Mepo4g03485 195 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 25 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03485 Mepo-Chr4 44238031 44238803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03485 64 174 PHD Transcription Factor Family AT5G58610 32.331 1.06e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03485 - - mtr:25484704 320.087