Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03481 ATGGATTCATTCGAACCAAACACAGATTCAACTCATTCAAACACATCACAAGAATCCAATCACAAGAAACGCCGCAAAATCGATAACCTCACCACCGATCAAAACTCCATCAATCTCATGCCATGGAGATCCCAATCTGACCAAAACACCTACTCCAAAAAACTCATCCAAGCACTCCTCCGTATAAATTCCCCGGAAACAACCAAACCTGCCGCCCGTCAAGTCCGTCAAACCGCCGATCGAGTCCTCGCCGCAACCGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAATGGAAGAAACTCAGAAGACATCACAAAAAAGTCAAGAAAGCTTCCACCAACGGATTGAAGAAATCTTCCAACAACAACAACGGATTGAAGAGAGAGAGGATTCAACTGTTACCGGCTTTGCAGAAGAAAACACGCGTTCTCGGCCGATTAGTTCCCGGTTGCCGGAAAGTTCCGTTACCGAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCTTTGGAGATGCAAGTGCGTGCGATGACAGCTCTTGCTGAGCTTCTCGCCGGTGGAACACCGGCGGGAATCGCCGGTCAGGTGTTGAGTTGA 606 0.4818 MDSFEPNTDSTHSNTSQESNHKKRRKIDNLTTDQNSINLMPWRSQSDQNTYSKKLIQALLRINSPETTKPAARQVRQTADRVLAATAKGRTRWSRAILGKWKKLRRHHKKVKKASTNGLKKSSNNNNGLKRERIQLLPALQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGGTPAGIAGQVLS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03481 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 189 IPR036638 GO:0046983
Mepo4g03481 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 187 IPR044660 GO:0006355
Mepo4g03481 201 MobiDBLite consensus disorder prediction 1 15 - -
Mepo4g03481 201 MobiDBLite consensus disorder prediction 1 33 - -
Mepo4g03481 201 MobiDBLite consensus disorder prediction 16 30 - -
Mepo4g03481 201 MobiDBLite consensus disorder prediction 106 126 - -
Mepo4g03481 201 CDD bHLH_AtIBH1_like 129 184 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03481 Mepo-Chr4 44183747 44184810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03481 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 40.909 4.56e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03481 - - gmx:100783462 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03481 4 44183747 44184810 Mepo4g03481 4 44183747 44184810 ECH