Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03476 ATGGATTTTCAGGGTTTCTTAAACGACTTGCAGGATTGGGAACTTTCTACAAAGGATAAAGCGTCCAAAACCAAGTCACATAAGGAAAATAAATTCATAAAGGGTTCATCTTCTTGGAGTGATCAATCAGTGGGTCTGGAGAATGGATCAAAAGGAAATACTATTGCTGTTGATCATGTGAGAAATTCTTCAGCTCAGTATGATTTCTCAAGAAATAATGACGTGTTGAGTCGTGTGAGTAGCAGTTTGGCTTCTGAAGATGTTCCTGATGCTGCTTCCGAGAAAGACCTGGGTAATGAGTTTTTCAAACAGAAGAAGTTTAAGGAAGCTATTGATTGCTATTCAAGGAGCATTGCCTTCTCACCCACTGCTGTAGCCTATGCAAATAGGGCAATGGCCCATATAAAGCTAAGAAGCAAATTTCAAGAGGCCGAGGATGACTGTACAGATGCCTTAAATCTCGATGATCGTTACATTAAAGCATACTCTCGGCGAGCAACGGCTAGAAAAGAACTTGGCAAAAATAAAGAATCCATGGAGGATGCCGAGTTTGCCATGAGGTTGGAGCCTAACAATCAAGAAGTCAAGAAACAATATGCCGATGCTAAGTCACTGTACGAGAAGGAAATTCTACATAAAGCATCCAAAGCACTAAGAAACACTGTAGAAAAAGTGGGAAAGTCCGAGACAAAAGTGAATGGAAGCAGCAGCATCCACTCCGTTTCACATGATACTAAAAAGTCAGGGTCAACTGAAGCTCATCATCAAATAAAGGGTAATGAGCGGCAAATTCCTGCTAAAGAACCACTCTTAATGGAGGAGATCACTAATAAGGATACAAAATCTGCAAGCAGGACTCAAGGACTAGTAGGAAATGGTTCTAAGGAAGGTTATAATGCAAGCCACAGCTTGGAACAGAGAAATCATAAAACTAAGCCAGAAATTAAAGCATCTGTTGAACAGCTTGCTTCTCAAGCTGCTTCTCGAGCCATGGCAGAAGCTGCAAAGAACATAACGCCACCAACTACAGCTTATCAGTTTGAGCTCTCTTGGAGAGGGTTTTCTGGTGATCTTGCTTTGCAGGCTTGTCTATTAAAGGCAATGTCACCCCATGAATTACCGAAAATATTCAAAAATGCCTTATCTTCTACCCTGCTAGTTGAGATCATCAAGTGTGTTTCATCCTTTTTTGTCGAAGACATGGATCTAGTTGTTAGCTATATGGATAATTTAACCAAGGTACCGAGATTTGATGTGATCGTAATGTGCCTTCCATCAGCAGCTAAGGATGATTTGCGCAAGATCTGGAATGAAGTGTTCTGCGCTGAGGCAACTCCAATCGAGTATGCTGAGATTCTGGACAACCTCCAATCAAAATTCTACCTTGGATAG 1392 0.4116 MDFQGFLNDLQDWELSTKDKASKTKSHKENKFIKGSSSWSDQSVGLENGSKGNTIAVDHVRNSSAQYDFSRNNDVLSRVSSSLASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIAFSPTAVAYANRAMAHIKLRSKFQEAEDDCTDALNLDDRYIKAYSRRATARKELGKNKESMEDAEFAMRLEPNNQEVKKQYADAKSLYEKEILHKASKALRNTVEKVGKSETKVNGSSSIHSVSHDTKKSGSTEAHHQIKGNERQIPAKEPLLMEEITNKDTKSASRTQGLVGNGSKEGYNASHSLEQRNHKTKPEIKASVEQLASQAASRAMAEAAKNITPPTTAYQFELSWRGFSGDLALQACLLKAMSPHELPKIFKNALSSTLLVEIIKCVSSFFVEDMDLVVSYMDNLTKVPRFDVIVMCLPSAAKDDLRKIWNEVFCAEATPIEYAEILDNLQSKFYLG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03476 463 ProSiteProfiles TPR repeat profile. 91 124 IPR019734 GO:0005515
Mepo4g03476 463 MobiDBLite consensus disorder prediction 225 312 - -
Mepo4g03476 463 Pfam Potential Monad-binding region of RPAP3 340 429 IPR025986 -
Mepo4g03476 463 Gene3D Tetratricopeptide repeat domain 79 190 IPR011990 GO:0005515
Mepo4g03476 463 SUPERFAMILY TPR-like 86 204 IPR011990 GO:0005515
Mepo4g03476 463 MobiDBLite consensus disorder prediction 227 244 - -
Mepo4g03476 463 MobiDBLite consensus disorder prediction 245 262 - -
Mepo4g03476 463 MobiDBLite consensus disorder prediction 17 45 - -
Mepo4g03476 463 MobiDBLite consensus disorder prediction 17 34 - -
Mepo4g03476 463 MobiDBLite consensus disorder prediction 281 301 - -
Mepo4g03476 463 SMART tpr_5 159 192 IPR019734 GO:0005515
Mepo4g03476 463 SMART tpr_5 91 124 IPR019734 GO:0005515
Mepo4g03476 463 SMART tpr_5 125 158 IPR019734 GO:0005515
Mepo4g03476 463 PANTHER OS05G0129900 PROTEIN 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03476 Mepo-Chr4 44129049 44135988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03476 95 162 U-box Gene Family AT3G07370 42.029 3.06e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03476 K23002 - gmx:100784528 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03476 4 44129049 44135988 Mepo4g03476 4 44129049 44135988 ECH