Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03442 ATGGGTCATTTTTCATCCATGTTCAATGGATTCGCAAAGTCATTGAAAATGAAGAAAGGAAGCACTAAATGTAGTGGGAGAGAAGCTGCTGAAGCATTGGCAAAAGAAGCAAAAAGAAATCGCTCCTTTATCAATAGCTCTGGCATCGTTAATGTTGAAGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTTAACCAAGATTGCTGCATAGTGTGGGATGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCTTGGGGTCACTATGTGTCAAGAACAGTAAGAGAGTCAATGCCATCAGCTTTGTTATGCAACTGGCAGGAGACACTTTCTCAAACTTCAATTGATCCAGAAATTGATTTAAAGACAGGGAAAAAACAACAGTTTGATATATGGAAGCATTCTTACTTGAAGACATGTGCTTCGATCGATCGAGAACTAGAGCAGAATCGCAAGATTGATTCGTTTTTCAGTGGAACGACGGCAGTGTCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGAGATTCTCGTGCTGTTTTAGCTACAACATCAGATGATGGAAATTTGGTTCCGATTCAGCTAACAATAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAGAGAATACTTGACTGCCAAGGGCGAGTATTCTGCCTAGACGATGAGCCTGGGGTGCACCGCGTGTGGTTGCCAGACGAGGAGTCTCCGGGACTAGCCATGTCAAGAGCTTTTGGTGACTATTGCATGAAAGACTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATTACAAGCAAAGACCAGTTTGTTGTGCTAGCCAGTGATGGGGTTTGGGATGTGATCTCTAATCAAGAAGCAGTGGATATTGTGTCTTCAACAAAAGACAGAACAAGTTCATCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAATGCAAGAGACGAGGTATTGCTATGGATGATATTTCAGCCATATGTCTATTCTTTCATTCCTAG 1056 0.4195 MGHFSSMFNGFAKSLKMKKGSTKCSGREAAEALAKEAKRNRSFINSSGIVNVEGSNNFASVFSKRGKKGVNQDCCIVWDEFGCQEDMIFCGIFDGHGPWGHYVSRTVRESMPSALLCNWQETLSQTSIDPEIDLKTGKKQQFDIWKHSYLKTCASIDRELEQNRKIDSFFSGTTAVSIVRQGELIVIANVGDSRAVLATTSDDGNLVPIQLTIDFKPNLPQEAERILDCQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCMKDYGLISVPEVTQRNITSKDQFVVLASDGVWDVISNQEAVDIVSSTKDRTSSSKRLVECAMHAWKCKRRGIAMDDISAICLFFHS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03442 351 Gene3D - 45 350 IPR036457 -
Mepo4g03442 351 ProSiteProfiles PPM-type phosphatase domain profile. 58 349 IPR001932 -
Mepo4g03442 351 PANTHER PROTEIN PHOSPHATASE 40 347 IPR015655 GO:0004722|GO:0006470
Mepo4g03442 351 Pfam Protein phosphatase 2C 79 319 IPR001932 -
Mepo4g03442 351 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Mepo4g03442 351 SMART PP2C_4 49 347 IPR001932 -
Mepo4g03442 351 FunFam Probable protein phosphatase 2C 34 49 351 - -
Mepo4g03442 351 CDD PP2Cc 57 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03442 Mepo-Chr4 43852043 43855439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03442 1 350 PP2C-type Phosphatase Gene Family AT3G05640 69.296 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03442 - - gmx:100793051 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03442 4 43852043 43855439 Mepo4g03442 4 43852043 43855439 ECH
Mepo3g03935 3 48830750 48834266 Mepo4g03442 4 43852043 43855439 PCT