Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03433 ATGAGTAGTAATCAAGCTAATCATTTGCAAACATTGCTTAGTGCTGTTTTAACCAATCATCAAACATGTCTAGATGGTTTTCTTGAGGTAAATCCTTTTCCAAAAATTAGCACTACCTTATCAAACTCTCTTTCTGATGTGAACAAACTTTATAGGATAGCTATTCAGTTTTTCACTATACGTCGGACTCAAACTATCATTGCAAGATTAACAAATCAAATTACAATTACAACAAATAATAGAAAGTTGTTACAGACAAGTGTTGACAATGTAATGGTGAGACAGAAAGTGATTGTCAACCCTAATGGATCTGGTGATTTTGTCACTATAAATGATGCTGTGGATGCTGCACCTACCAAAACAGGCACCAACAATGGGTACCATGTAATCTATGTGGTTGCTGGGATTTATAGTGAGTATGTTTCTATTCCTAAGAGTAAAGAGAATCTAATGATCGTTGGAGATGGCATCGGTCGGACTATCATCACTGGAAATCGCAGCGTGGTTGATGGTTGGACCACTTTCCAATCCGCAACTTTTGCTGTAACGGGAAAAGGGTTTGTAGCAGTGAACATAACATTTCGTAACACTGCGGGATCCAACAAGCATCAAGCAGTTGCAGTAAGAAACGGAGCTGACATGTCAGTTTTCTATAAATGTAGCTTTGAAGGTTACCAAGACACATTATACGCGCATTCCCTTAGACAATTCTACAAAAACTGCGACATATATGGAACAATTGATTTCATATTTGGCAATGCAGCTGCAATATTCCAAAACTGTAACATCCATCCAAGACTTCCAATGCAAAATCAATTCAATGCAATTACAGCACAAGGAAGAACAGATCCTAACCAAAACACAGGGTTCTCTATATGGAATTGTTACATTGTAGCAGCTAGTGAATTGGGTGGTGCAAATAATAATTATAATGACATAAAGACATATTTGGGTAGGCCTTGGAAAGAGTATTCAAGGACAATTTATATGCAAAGTTTTATTGATGGTTTAATTGATCCTAAGGGGTGGATGGAATGGTTAGGAGAATTTGCATTAAGCACATTGTATTATGCAGAGTATGCTAATTGGGGACAAGGTTCAAATACTAGTAATAGGGTCACATGGAAAGGGTACCATCAAATTGATGGAAAAGATGCTGATGAATTTACGGTTAACAAATTTATACAAGGTGACACGTGGTTGCCTATGACTGGAGTGCCTTTCAGAGCTGGGTTTCAGTGA 1242 0.3752 MSSNQANHLQTLLSAVLTNHQTCLDGFLEVNPFPKISTTLSNSLSDVNKLYRIAIQFFTIRRTQTIIARLTNQITITTNNRKLLQTSVDNVMVRQKVIVNPNGSGDFVTINDAVDAAPTKTGTNNGYHVIYVVAGIYSEYVSIPKSKENLMIVGDGIGRTIITGNRSVVDGWTTFQSATFAVTGKGFVAVNITFRNTAGSNKHQAVAVRNGADMSVFYKCSFEGYQDTLYAHSLRQFYKNCDIYGTIDFIFGNAAAIFQNCNIHPRLPMQNQFNAITAQGRTDPNQNTGFSIWNCYIVAASELGGANNNYNDIKTYLGRPWKEYSRTIYMQSFIDGLIDPKGWMEWLGEFALSTLYYAEYANWGQGSNTSNRVTWKGYHQIDGKDADEFTVNKFIQGDTWLPMTGVPFRAGFQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03433 413 SUPERFAMILY Pectin lyase-like 95 410 IPR011050 -
Mepo4g03433 413 Gene3D - 90 412 IPR012334 -
Mepo4g03433 413 Pfam Pectinesterase 97 398 IPR000070 GO:0030599|GO:0042545
Mepo4g03433 413 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 60 IPR035513 -
Mepo4g03433 413 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Mepo4g03433 413 FunFam Pectinesterase 90 412 - -
Mepo4g03433 413 PANTHER PECTINESTERASE 3 402 - -
Mepo4g03433 413 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 59 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03433 Mepo-Chr4 43788371 43790201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03433 1 412 Carbohydrate Esterase AT4G02330 53.880 2.85e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03433 K01051 - gmx:100810329 648.277