Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03431 ATGTCAAACCAGCAATGCATTGTGACCGCACAAGGAAGAAAAGAAAGAACGGCACCATCAGCAATAGTCATCGAAGGAGGCTCTATTGTTGCTGACCCTGAGTTCTATCCAGTCAGGTTTGACCACAAGTCCTACATAGCCCGTCCATGGAAGAACTTCTCTAGGACTATAATCATGGATACATTCATCGATGATTTGATTCATCCCGATGGTTTTTTGCCATGGCATACAGAAGAGGGGCCTATTAATATGGACACTTGCTTCTATGCTGAATACCATAACTATGGCCCTGGTTCAGACAAATCAAAGCGTGTGAAATGGGCTGGAATCTATAACCTCAATTCAAAGGCTGCACATAGGTTTGCACCATCCAAGTTCTTCCATGGTTGTGACTGGATTAAGGACACTGGAATTCCTTACTTTCCAACTATACCTGAACACAAGAAGCACAAAAAGACATCGCTTAAATGGTGA 474 0.4304 MSNQQCIVTAQGRKERTAPSAIVIEGGSIVADPEFYPVRFDHKSYIARPWKNFSRTIIMDTFIDDLIHPDGFLPWHTEEGPINMDTCFYAEYHNYGPGSDKSKRVKWAGIYNLNSKAAHRFAPSKFFHGCDWIKDTGIPYFPTIPEHKKHKKTSLKW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03431 157 SUPERFAMILY Pectin lyase-like 2 143 IPR011050 -
Mepo4g03431 157 PANTHER PECTINESTERASE 1 134 - -
Mepo4g03431 157 Gene3D - 1 145 IPR012334 -
Mepo4g03431 157 Pfam Pectinesterase 1 129 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03431 Mepo-Chr4 43773012 43773485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03431 1 140 Carbohydrate Esterase AT5G49180 46.429 3.60e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03431 K01051 - lja:Lj0g3v0289939.1 271.552