Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03412 ATGCAGAGGGCTGGAGAGGGTGACAAGGAGGGAATTAAAGTGAGGACTGAAGTGAAAGTTTTTGAGAATCAAAGAGAGGCTGAAGTGGCTCAAGCTAATTCTGAGTTGGCTAAGAAGAAAGCGGCTTGGACCAAGGCGGCTCAGGTGGCCGAAGTTGAGGCGAAGAAGGCCGTGGCTCTAAGGGAAGCTGAGTTACAAGGTGAAGTTGAGAGGATGAATGCTTTGACTACTACTGAAAAGCTTAAAGCTGAGTTCCTTAGCAAAGCTAGTGTTCAATATGAAACCAAGAACTACCAAAACACATATGATAATGGCTTAGCCTTCATTGATGCTGATCATGTCAAGTTTCCAACACACTCAGATGGCTTTATTTCAAAAGAGAATGCTTCAACTGATGAAAACAAAGCTCCTCCACTTAAGAACAAGATCAAGAAAGGGCAGTATCATTGGGATGAAGAACAGCACAGGTTATTTCTAGAGGGGTTCGAGAAGTATGGCAACAGTGGCAAGGGGAAATGGATAAAGATTGCAGAACATGTTGGTACAAAAACCTCAACTCAAGTTGCTAGCCATGCTCAAAAGCATTTCATTCGAATTAAAGAAAGTGTTAATTTATCAAAAAAGAGGAAAAGAAGAAGCATCTTTTACACTTCTAACTCATGGGATGGAAGTTTTCACCCTCTTCTCTATAGGGACACCATTCCATCTCCATTTCCATCCCCTTCTCCTTCAAATGTTGAAACACAACCAATTGTGGAGCAGATACTACACCAACTTCAACAAACCCAAGAAGCATTGTGGAACGACAATGTCATATTGTCATAA 825 0.4158 MQRAGEGDKEGIKVRTEVKVFENQREAEVAQANSELAKKKAAWTKAAQVAEVEAKKAVALREAELQGEVERMNALTTTEKLKAEFLSKASVQYETKNYQNTYDNGLAFIDADHVKFPTHSDGFISKENASTDENKAPPLKNKIKKGQYHWDEEQHRLFLEGFEKYGNSGKGKWIKIAEHVGTKTSTQVASHAQKHFIRIKESVNLSKKRKRRSIFYTSNSWDGSFHPLLYRDTIPSPFPSPSPSNVETQPIVEQILHQLQQTQEALWNDNVILS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03412 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 200 IPR017930 -
Mepo4g03412 274 ProSiteProfiles Myb-like domain profile. 150 196 IPR001005 -
Mepo4g03412 274 PANTHER TRANSCRIPTION FACTOR KUA1 96 219 - -
Mepo4g03412 274 Gene3D - 146 202 - -
Mepo4g03412 274 SUPERFAMILY Homeodomain-like 143 201 IPR009057 -
Mepo4g03412 274 Pfam Myb-like DNA-binding domain 150 195 IPR001005 -
Mepo4g03412 274 ProSiteProfiles SANT domain profile. 150 200 IPR017884 -
Mepo4g03412 274 CDD SANT 150 196 IPR001005 -
Mepo4g03412 274 SMART sant 146 198 IPR001005 -
Mepo4g03412 274 NCBIfam myb-like DNA-binding domain, SHAQKYF class 146 198 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03412 Mepo-Chr4 43600242 43605195 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g03412 Myb_DNA-binding 5.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03412 K07192 - tpra:123922541 162.925