Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03408 ATGGATCAAGCAAGATCGAACAACATCGATGAGAATGTAGGAATTCCAGACGATTTACGTTGCAAGAGATCAGACGGGAAACAATGGAGATGCACAGCCATGTCGATGCCAGATAAAACCGTTTGCGAGAAGCATTACATTCAAGCCAAGAAAAGAGCAGCCAATTCCGCCATGAGAGCTAATCTCAAGAAATCTAAGCCTGATTCTGATGTTAATTTGGAGAGTAAGAGTGATGATTTTGATGCCCCTCTTTCCACTGCGGTTAATAATAATAATCATCGTTCTTCTTCTTCCTCTGGGAAGAAGTTGTTTGATAAGGTTTCTAAGAATCAGTTTCGGTATACTCCCGAGGGTGTTCTTGGTTCTTCTTCTGGAAATAATGTTTCCAAGCTTGGTGATGCTGGTGATGTTTCGCCTGATGAGGATGCTGTTCTGTTTGAAGAGAATTGGGTCTCGAATGATTCGCAACATGCTTCTGGTGACGATTCTGCCGGGAAAATAACAGGCAGGAGCATGGATGTTGATATCAACACTGAATGTTCTAATGGAACATCGGATTCTTCTCAAGAAACTGGCGGGCAGACTTGCCATCAGTGTAGGAAGAATGTTAAAGATGTTACTTGGTGCCTTAAGTGTGATAGGAGAGGATACTGTGATAGCTGCATATCAACATGGTATTCTGACATTCCATTGGATGAAATTCAGAAGATATGCCCTGCATGTCGTGGTATATGCAATTGTAAAATTTGCCTACGTAGTGATAATTCAATAAAGGTTCGGATACGTGAGATACCTGTACTGGATAAGTTACAGTATTTGCACGTGTTGCTCTCGTCAGTGCTTCCCGTGGTAAAGCAGATCCACCGAGAACAATGTTTTGAAGTTGAACTGGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCCAAGGACAAAATTGAATGCAGACGAGCAGATGTGCTGCAATTTATGTAGGATACCTATCACTGATTATCATCGACGCTGCCCAAGTTGTTCATATGATTTGTGTCTTATTTGTTGTCGAGATCTTCGGGAAGCTACTTTACATCAGAGTGAAGAACCTCAAACTGAGCAAGCAAAAACTACTGATCGAAACATATTAAGCAAGTTTCCTCACTGGAGATCCAATGACAATGGAAGTATTCCATGCCCTCCTAAGGAGTATGGTGGTTGTGGTTATTCATCATTAAATTTAAGTCGGATTTTCAAGATGAATTGGGTCGCGAAATTGGTAAAAAATGTAGAGGAAATGGTTAGTGGATGCAGAACGAGTGATGCTGGTGGTCCGCCAGAAACCGGATTGAATGCTCTCAGACTTTGCCAATATTCTCACAGAGAGGCTAGCAATGATAATTATCTTTATTGTCCAACATCTGAAGAACTCAAAACTGATGGGATTGGCATGTTTAGAATACACTGGAAAACTGGTGAGCCCATTATCGTTAAGCAAGTATTTGATAGGTCATCAATTTCAAGCTGGGACCCATTGGTCATATGGAGAGGGATTCTTGAGACAACAGATGAGAATATGAAAGATGATAGCAGAATGGTTAAGGCCATAGATTGCTTAGATGGGTCTGAGATTGATATCGAGCTTAATCAGTTCATGAAAGGATATTCTGAGGGGCATATTCTTGAAAATGGTTCGCCACAAATATTGAAGCTGAAGGATTGGCCTACACCTCGTGCATCTGAAGAATTTCTTTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGACCCAAGATCTATATATCTTATGGGATTAGTGATGAACTTGGCAGAGGTGATTCTGTGACAAAACTCCACTTCAATATGCGTGACATGGTGTACCTTTTGGTTCATTCAAGTGAAGTAAAGCTGAAGGACTGGCAGCGGACAAAAGTTGAAATGATGCAGAAAACTTCTAAGGAATCTGAGGCGAAAGAATCTCATGGGGATCCAGATATATGTTCAAGAGCGAGTTCACCCGATTCATCCTTTTGTACAAAAGTTAATGGACTGGATTTGGAATCAGACCAGAAAGATTCAACTATGGATCAAGCGGTTGAAGTTTATTCTAGTGCCGAAGAGAATTTGGTTAATTGTGAAATTCCATTAAGACAAAATGGAGACGTCTCTGAGATAACACATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCAGGATGTTCCAAAGGTGACTGAATATTTGAAAATGCATTGGAAGGAATTTGGGAAGTCAGATGATATAGTTACATGTCCTCTTTATGGTGGAGCTATTTTTCTTGACAGACACCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAGCCGTGGTCGTTTGAACAGAATTTGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTTCAAGCAAGAAATGTTCAGTCCACTGTTCAGTTGGCCCTTGATTTCTTATCTCCTGAAAGCCTGGGAGAGGCTGTAAGATTGGCAGAGGAGGTTCGCCGTCTACCTAACGAACATGAAGCAAAACATCAAGTTTTGGAGGTGGGGAAGATATCTCTTTATGCAGCAAGTTCAGCAATCAAAGAAGTTCAGAAACTTGTACTTGACCCAAAACTTGGTGGAGAGATCGGATACGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAACTACGAGAAGATGTCCAAGCAGAGGCAGATAACTTGTGCTTGA 2787 0.4126 MDQARSNNIDENVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKSKPDSDVNLESKSDDFDAPLSTAVNNNNHRSSSSSGKKLFDKVSKNQFRYTPEGVLGSSSGNNVSKLGDAGDVSPDEDAVLFEENWVSNDSQHASGDDSAGKITGRSMDVDINTECSNGTSDSSQETGGQTCHQCRKNVKDVTWCLKCDRRGYCDSCISTWYSDIPLDEIQKICPACRGICNCKICLRSDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRTKLNADEQMCCNLCRIPITDYHRRCPSCSYDLCLICCRDLREATLHQSEEPQTEQAKTTDRNILSKFPHWRSNDNGSIPCPPKEYGGCGYSSLNLSRIFKMNWVAKLVKNVEEMVSGCRTSDAGGPPETGLNALRLCQYSHREASNDNYLYCPTSEELKTDGIGMFRIHWKTGEPIIVKQVFDRSSISSWDPLVIWRGILETTDENMKDDSRMVKAIDCLDGSEIDIELNQFMKGYSEGHILENGSPQILKLKDWPTPRASEEFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGISDELGRGDSVTKLHFNMRDMVYLLVHSSEVKLKDWQRTKVEMMQKTSKESEAKESHGDPDICSRASSPDSSFCTKVNGLDLESDQKDSTMDQAVEVYSSAEENLVNCEIPLRQNGDVSEITHPGVLWDVFRRQDVPKVTEYLKMHWKEFGKSDDIVTCPLYGGAIFLDRHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSTVQLALDFLSPESLGEAVRLAEEVRRLPNEHEAKHQVLEVGKISLYAASSAIKEVQKLVLDPKLGGEIGYGDPNLTAMVSENYEKMSKQRQITCA 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03408 928 Gene3D Cupin 455 867 - -
Mepo4g03408 928 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 191 255 IPR018866 -
Mepo4g03408 928 MobiDBLite consensus disorder prediction 57 103 - -
Mepo4g03408 928 ProSiteProfiles Zinc finger RING-type profile. 196 242 IPR001841 -
Mepo4g03408 928 MobiDBLite consensus disorder prediction 82 103 - -
Mepo4g03408 928 Pfam WRC 16 56 IPR014977 -
Mepo4g03408 928 MobiDBLite consensus disorder prediction 667 684 - -
Mepo4g03408 928 ProSiteProfiles WRC domain profile. 15 59 IPR014977 -
Mepo4g03408 928 SUPERFAMILY Clavaminate synthase-like 479 868 - -
Mepo4g03408 928 ProSiteProfiles JmjC domain profile. 568 858 IPR003347 -
Mepo4g03408 928 MobiDBLite consensus disorder prediction 63 77 - -
Mepo4g03408 928 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 17 892 IPR045109 GO:0032454|GO:0033169
Mepo4g03408 928 MobiDBLite consensus disorder prediction 667 695 - -
Mepo4g03408 928 Pfam JmjC domain, hydroxylase 749 841 IPR003347 -
Mepo4g03408 928 SMART cupin_9 575 858 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03408 Mepo-Chr4 43569638 43578349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03408 16 56 GRF Transcription Factor Family AT3G13960 46.341 1.88e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo4g03408 JmjC 2.6e-07 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03408 K15601 - gmx:100801287 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03408 4 43569638 43578349 Mepo4g03408 4 43569638 43578349 ECH