Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03401 ATGGCACCGACAAGGAAATCTAGAAGTGTGAATAAGCGGTTTAAAAATACAAATGATATTTCTCCTGAGAAAGATGGAGTTGGCTCAAGTAAAAACAAGCAACGGAAGAAGAAGTTGTCTGATAAACTGGGATCTCAGTGGAGCAAGGGGGAACTAGAGCGATTCTATGAAGCATATAGAAAGCATGGTAAAGATTGGAAGAAGGTGGCTGCTGCTGTACGTAATAGATCCATTGAAATGGTGGAAGCTCTTTACAATATGAATCGGGCATATCTATCTCTACCAGAGGGGACAGCTTCTGTTGTAGGACTCATTGCAATGATGACAGATCATTATAATGTCCTGGAAGAGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTGAAACGAAAGCGTGAAAAACTTCAGCTTAATGTCTCAAAGGATCCTGTCCAGTCTCAGTCTGTAACTTCCAGTGATGGTTGCCTCTCTCTACTGAAGAAAAGACGCATTGATGGTCTGCAGCCTCGTGCTGTTGGAAAAAGGACACCGCGAGTCCCAGTTTACCACTCTCAGAAGAAAGATGATAGGGAGAATTATGTTTCGCCTAACAAAAGAAGCTTGAAGTCTACTGTTGATGGTAATGATGACGAAGTTGAACATGTAGCTTTTGCATTAAGCAGGGCTTCACAAAGAGGAGGCTCTCCCCTAGTTTCTCAGACACCACATAGGAGAGGAGAACAGAAGTTCTCTCCTGCTCAGAGCCGTGATAGAATGCGCCAAATGCCAGAGACAGCCCGTGCCAAGTTTCACTATGCTTCTGTGGATGGAGAGTTTTTGGAAGGTAGTCTTGAAAGCAGGGGAGCTGAAAATGGAGAATATGTTAGAGATACTAGTTCCTTGATGGATATGGAAGGAACGAGCACTGCTGGAGTTCCTAAGGGAGGAAAATTTTACAGAAAGAAAGAAAGAGTGGAAAATGTTGGAAATTATCAGCTTGATGATGGAGGAGAAGCATGCAGCGGCACTGAAGAAGGGCTAAGTTTTAATTCTTTGAAGGAAAATAATATGGAGGTAACTAACGAAAAGCTTGAGCAATTCTCCCCGACAAGTCAGCGGAAAAGAAACAAAAAACTCCTCTTTGGAGGTAATTCTGTCAATAAGGATGTCTTTGGAGATGAAATCCACGCCTTGGATGCTTTGCAAACTTTGGCCGATCTATCTCTAATGATGCCGTCTTCTGAAGTAGAATCTGAATCATGTGTCCAGTTGAAGGGAGAAAGAATGATGGTTGATAAAGACGATAAGTCTGCTTTACCCGAATCAACATCAACAAGCCATAAGAGAAATAAAGTAAAAATTCGTGCGGTCCCTGGACCTGACACTTCAACGTCCAAAAAATCTAAACTCAAGGATATAGCAATTGATACCAATGCTCTCTCTGAATCAAAAGAACAGCTTCCATTTGCTGATAAAACATGGAAGAGAAAGCCAAAGTCCACGGTGTCAAAGGCTGTAGATGATGAGAAAAAAACGGGGATTAAAGGAAAATACACCGATCAAGTTTTTGCCTCACCAAAACAAATAAAGACGGTCAAACCTTCTGAGGTTTTACTGTGTGCTGATCAGAAAGGTTTAGCGGTATCAACTTCTGAAATTCCACTTTTAAGTGAAGTTAGTTCACCAACTAAACAAAGAAGTAGACGCAAGATGATTTTTCAGAGACCATCCATGCGTAAAGAGCAGTCTTATGAGAATGTATTCAAAAGTCAACCTAATAAGCACTCTACCCAAAAGGAAAAGCTTTCTAGCTGTTTGTCATCTTATTTGGTTCGCAGATGGTTTACTTTTGAATGGTTTTATAGTGCACTTGATTATCCATGGTTTGCCAAAAGAGAATTTGTGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCACGCAGGTTTTCGGAACACTTTTTATATGAAGAAAGACAAAAACTTGAACAGTATCGAGAATCGGTGAGGAAACATTATTCTGAGCTGCGGACTGGTATAAGAGATGGTCTTCCAACAGATTTGGCAAGACCATTATATGTTGGACAACGTGTAATTGCCATTCACCCCAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGCAGAATTCAGTTCGACCGTCCCCAGTTAGGAGTTGAATTCATCACGGACATTGATTGCATGCCTTTGAATCCATTAGATAATATGCCCGAAGCTTTGAGGAGACAGATTGGTGCCAGAAAAGCCTCTTTTACGACTATAGAACCACATATTAATGGAAATTCAAGTTTTGGGGGATGTGAAATGCATGCTTCACCTGTGAAGGTGGATGCTAACCATGTCACTTCCCAGGCCAATATTGGTAACCTCTGTGCACAAGCTGCCTCTGCTCAACCGTGTAAAGTGATGCAACATCAATCTAAAGAAGCTGATATACATGCACTTTCTGAATTAAAGCGTGCTCTAGATAAAAAGGATACACTATTAGCAGAGCTTCGAAATGCTAATAATGGCATATTGGAAAACCAAAATGGCATAGAATGTTTAAAAGATTCTGAAGGTTTCAAGAAGCATTATGCCACGGTACTTGTAGAGCTAAAGGAAGCCAGTGGACAGGTTTCTGATACCATGCTTCAATTGAGGCAACGCAATACCTACACGGAAACCTCTCTGCCACCATGGATGAAGCCCAAAGCAAATTTCGAAGGCCATGATGACCTTCCTAGTATGTTGGATAGTTCTATGACACAAGAGTCTAGGTCAACTGTCATTGAAATCATTAAAGGATCCAGGCTACAGGCACATGCAATGCTGGATGCTGCATTTCAGGCATGGTCTCAAGCTACAAAGGAAGGTAAAGATGCTATTACGAAGATTGGGCAGGCATTGGATTCTATTGATTATCAGCAGTTGTCCTCCAAGTACAGGTCGCCTGTGATAAGGTCTCAAGATCAAGTGAATGGCAGTTTTTATCATCATAATCAGTCGACTTGCAGAGCATCAGAACCTTTACTTAACGATGCATCTGGTCCGAAACTGCACAAAGAGTCTGACGAAGTTGAGATTGAAATACCATTTGAGCTCATCACTTCATGTGTGGCTACATTAACCATGATTCAGAGTTGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCTGCCGTTACCAGCCTGCAACCGTGCGATACACGAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCTACTTAG 3372 0.4164 MAPTRKSRSVNKRFKNTNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGKDWKKVAAAVRNRSIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERESNDAPGSRKPVKRKREKLQLNVSKDPVQSQSVTSSDGCLSLLKKRRIDGLQPRAVGKRTPRVPVYHSQKKDDRENYVSPNKRSLKSTVDGNDDEVEHVAFALSRASQRGGSPLVSQTPHRRGEQKFSPAQSRDRMRQMPETARAKFHYASVDGEFLEGSLESRGAENGEYVRDTSSLMDMEGTSTAGVPKGGKFYRKKERVENVGNYQLDDGGEACSGTEEGLSFNSLKENNMEVTNEKLEQFSPTSQRKRNKKLLFGGNSVNKDVFGDEIHALDALQTLADLSLMMPSSEVESESCVQLKGERMMVDKDDKSALPESTSTSHKRNKVKIRAVPGPDTSTSKKSKLKDIAIDTNALSESKEQLPFADKTWKRKPKSTVSKAVDDEKKTGIKGKYTDQVFASPKQIKTVKPSEVLLCADQKGLAVSTSEIPLLSEVSSPTKQRSRRKMIFQRPSMRKEQSYENVFKSQPNKHSTQKEKLSSCLSSYLVRRWFTFEWFYSALDYPWFAKREFVEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLYEERQKLEQYRESVRKHYSELRTGIRDGLPTDLARPLYVGQRVIAIHPKTREIHDGSVLTVDHDKCRIQFDRPQLGVEFITDIDCMPLNPLDNMPEALRRQIGARKASFTTIEPHINGNSSFGGCEMHASPVKVDANHVTSQANIGNLCAQAASAQPCKVMQHQSKEADIHALSELKRALDKKDTLLAELRNANNGILENQNGIECLKDSEGFKKHYATVLVELKEASGQVSDTMLQLRQRNTYTETSLPPWMKPKANFEGHDDLPSMLDSSMTQESRSTVIEIIKGSRLQAHAMLDAAFQAWSQATKEGKDAITKIGQALDSIDYQQLSSKYRSPVIRSQDQVNGSFYHHNQSTCRASEPLLNDASGPKLHKESDEVEIEIPFELITSCVATLTMIQSCTERQYPPADVAQILDSAVTSLQPCDTRNLPIYREIQMCMGRIKTQILALIPT 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03401 1123 ProSiteProfiles SANT domain profile. 42 77 IPR017884 -
Mepo4g03401 1123 SMART sant 43 91 IPR001005 -
Mepo4g03401 1123 Pfam DIRP 618 719 IPR033471 -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 173 211 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 116 158 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 1 44 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 116 144 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 227 257 - -
Mepo4g03401 1123 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Mepo4g03401 1123 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 187 202 - -
Mepo4g03401 1123 Coils Coil 844 867 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 26 44 - -
Mepo4g03401 1123 SMART DIRP_2 619 720 IPR033471 -
Mepo4g03401 1123 SUPERFAMILY Homeodomain-like 42 90 IPR009057 -
Mepo4g03401 1123 Gene3D - 4 99 - -
Mepo4g03401 1123 MobiDBLite consensus disorder prediction 231 247 - -
Mepo4g03401 1123 CDD SANT 47 81 IPR001005 -
Mepo4g03401 1123 PANTHER LIN-9 1 1123 IPR010561 GO:0006351|GO:0017053
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03401 Mepo-Chr4 43497032 43509248 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g03401 DIRP 5.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03401 - - gmx:100816217 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03401 4 43497032 43509248 Mepo4g03401 4 43497032 43509248 ECH