Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03381 ATGGATCATCAAGGTCATGGCCAAAACCCAAATATGGGTGTTGTTGGTAGTGGACAAATGGCCCCATATGGTTCTAATCCATATCAGCCAAACCCTATGACTGGGTCCCCTGGGATGGTTGTTCCCGCTGTTGGGACTATTCAACCTGGTGGTCAACCAGATGGAACTCAGCTGGGACAACATCAGCTTGCTTATCAGCACATTCATCAGCAGCAGCAGCAGCAGCAGCAACAACAACTCCAGACCTTTTGGGGAAATCAGTATCAAGAAATCGAGAAGGTAACTGATTTCAAAAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTGAAGATGATATCTGCTGAGGCGCCGGTTGTATTTGCAAGGGCGTGCGAAATGTTCATCTTGGAGTTAACCTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACACTTCAAAAGAATGACATCGCAGCAGCCATCACAGGAACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTAGGGAGGACTTGAAAGACGAAGTGCTTGCATCGATACCAAGAGGACCAATGCCTGTTGGAGGGCCTGCTGATGGAATTCCTTATTGCTATATGCCGCCTCAAAATGCACAGCAAGCTGGAAATCCTGGTCTTATGATGCATAATCCAAACATGTATGCTCCACAGTCTCATCCATACATGGCACCTCAAATGTGGCCCCAACCACCGGAGCAACAACAATCGCCTTCAGATCATTAG 771 0.4682 MDHQGHGQNPNMGVVGSGQMAPYGSNPYQPNPMTGSPGMVVPAVGTIQPGGQPDGTQLGQHQLAYQHIHQQQQQQQQQQLQTFWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPREDLKDEVLASIPRGPMPVGGPADGIPYCYMPPQNAQQAGNPGLMMHNPNMYAPQSHPYMAPQMWPQPPEQQQSPSDH 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03381 256 MobiDBLite consensus disorder prediction 233 256 - -
Mepo4g03381 256 SUPERFAMILY Histone-fold 69 173 IPR009072 GO:0046982
Mepo4g03381 256 MobiDBLite consensus disorder prediction 1 33 - -
Mepo4g03381 256 Pfam Core histone H2A/H2B/H3/H4 62 164 IPR007125 GO:0003677
Mepo4g03381 256 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 67 212 - -
Mepo4g03381 256 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Mepo4g03381 256 FunFam Nuclear transcription factor Y subunit gamma 67 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03381 Mepo-Chr4 43357173 43359727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03381 1 243 CCAAT-HAP5 Transcription Factor Family AT1G08970 65.574 1.14e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo4g03381 Histone 1.1e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03381 K08066 - gmx:100527803 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03381 4 43357173 43359727 Mepo4g03381 4 43357173 43359727 ECH
Mepo3g04009 3 49441133 49443814 Mepo4g03381 4 43357173 43359727 ECH
Mepo3g04009 3 49441133 49443814 Mepo4g03381 4 43357173 43359727 PCT