Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03360 ATGGCAAATGAGGGTGACTCTTGCCCGATAAATCATGGTTTATGGAAACATAAGAGAAGTTTTGCTAGTAAATCAAAGAAGATAGGATCTCTCTTTGCTTGGTCTGCTTCTGCTCAAGACTTAAGAAATATGGACCTTGAGAAAGAGAAAGATGATGAGGCATCTCCAAGAGGAGTCTTAGAGGCTTGTGTTAAAGGCTTTGATGCTCAACAACTACCTGAGTCGGAAACCAGTTGTTCAAATTCGAGGGCACGGTCCCATTGGGGAAAATTTTTTAAATTGTGGAAGAGAAAATCACTTAAACGCCTAGCTTCTATTCCTCCCATTGGTGTGCCAAAGATACCAAAATGGAAAAGTAGAAGCACTAGGGAAAATCTTGTTATGAGTAATCTATACAATTTTAGATCTTCTTTGGTGACTTTCAGCCTCTCTGACCTAAGAAATGCAACCAACCATTTCAGCCATGAAAATTTGATTGGAAGAGGTGGTTTTTCTGAGGTTTACAAGGGTTGTCTCCAAGGTGGACAACTAATAGCTGTGAAGAAAATGACTACAGGGAGCACGGATGAAAAGACAGTCGGCTTTCTATCTGAGTTAGGAATTATTGCTCATGTTGATCATCCTAATACTGCAAAGCTTGTTGGATGTTGTGTAGAGGGAGAAATGCATCTTGTCTTCGAATTGTCTACACTGGGAAGTTTAGGATATGTTCTTCATGGTTCAGATAAAACCAAGTTGGACTGGAGTAAAAGGTATAAAGTTGCTCTCGGAATTGCTGATGGTCTTCTCTATTTGCATGAGAATTGTCAAAGGCGAATAATTCATAGAGATATTAAGGCAGAGAATATTCTACTCACAGAGAATTTTGATCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTACCAGAACAATTGACTCACCATAATATGTCCACATTTGAAGGCACATTTGGATATTTATCTCCTGAATATTGCATGCACGGCATAGTGGATGAGAAAACTGATGTTTACTCTTTTGGTGTTCTACTTTTGGAGATCATAACTGGGCGTAAGGCTTTGGATTGTATGCAGACAAGTCTCGTAACATGGGCAAAACCTTTGCTTGATGCTAATAATATCAAGGACGTTGTTGATCCTTCTCTTGGAGGTAACTATGACCAAGGACAAATGGGATGTCTTAGTTTGACTGCATCAATGTGTGTTGAGCAGTCTCCTATTTTACGCCCTCGCATGAGTCAGGTAGTAACACTGCTAAGAGGGGAAAAATCTGTCATGCATGCAAGAGCATGCAGCAAAAGGAGGACTCTCCAAAGAACATATTCAGAAGAGCTACTTGATGCACAAGAATACAACTCAACAAAATATCTAAGAGATCTCAATCGACATAAAAAGATTTTGGGTCTTGAGGTCTAA 1416 0.3962 MANEGDSCPINHGLWKHKRSFASKSKKIGSLFAWSASAQDLRNMDLEKEKDDEASPRGVLEACVKGFDAQQLPESETSCSNSRARSHWGKFFKLWKRKSLKRLASIPPIGVPKIPKWKSRSTRENLVMSNLYNFRSSLVTFSLSDLRNATNHFSHENLIGRGGFSEVYKGCLQGGQLIAVKKMTTGSTDEKTVGFLSELGIIAHVDHPNTAKLVGCCVEGEMHLVFELSTLGSLGYVLHGSDKTKLDWSKRYKVALGIADGLLYLHENCQRRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQLTHHNMSTFEGTFGYLSPEYCMHGIVDEKTDVYSFGVLLLEIITGRKALDCMQTSLVTWAKPLLDANNIKDVVDPSLGGNYDQGQMGCLSLTASMCVEQSPILRPRMSQVVTLLRGEKSVMHARACSKRRTLQRTYSEELLDAQEYNSTKYLRDLNRHKKILGLEV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03360 471 ProSiteProfiles Protein kinase domain profile. 153 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03360 471 Gene3D Phosphorylase Kinase; domain 1 115 227 - -
Mepo4g03360 471 SMART serkin_6 153 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03360 471 SUPERFAMILY Protein kinase-like (PK-like) 131 419 IPR011009 -
Mepo4g03360 471 Pfam Protein tyrosine and serine/threonine kinase 156 361 IPR001245 GO:0004672|GO:0006468
Mepo4g03360 471 PANTHER OS08G0249100 PROTEIN 39 463 IPR046958 -
Mepo4g03360 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mepo4g03360 471 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Mepo4g03360 471 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 129 228 - -
Mepo4g03360 471 Gene3D Transferase(Phosphotransferase) domain 1 230 445 - -
Mepo4g03360 471 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 230 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03360 Mepo-Chr4 43161445 43165839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03360 138 471 Receptor kinase-like Gene Family AT1G53420 41.329 1.64e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo4g03360 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03360 - - cam:101512181 786.563