Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03354 ATGGAGTGCAACAAAGACGAGGCTGTGAGGGTAAAACAACTGGCGGAAACTAAGATGCAAACGGGTGAATTTGTAGAGGCACTGAAGTTTGCTAACAAGGCCAAAAAGCTGTATGCTGATGCTGAAAACATTGCTCAGATCCTTGCTGTTTGTGAGGTTCACAATGCTGCACTCAACAAACTCTCTATGTCTGAAATGGACTGGTATGGAATTCTTCAGGCAGAAAGTCTCTCCGAGGAAGCCATCATAAGGAAACAGTACAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGATGATTGGAGAAGCCAATAGCCTGTTGACTGACAAGGCAAAGCGATCTTTATACGACATGAAGGTTAAAGGCCATGTAAGACATGCAGTACCTAAGACCTCATACCATCACTCAAATGGGAATGTCTACGCAGATAAAAATTTAGCAGAATGTTTGAAAAAATATTCTTCAATGCGGTCATGCTGGACAATTTGTACACATTGTAATTGGGATCAGTTCTCCACATATACTATGAATAAGGCCCCACTCTGTCGGTATTGTAAGAAATCATTTATACCTGTTGATACAAGTAAACAGGCTGGCCCGTCATCTGTACCGTTTCGTGCCCCAAAAGTGGCTGCAATGCAGGCTCCACAACCATTTCATCACACAAATAGTGCAGCAAATCAAGTTCCAAATGCAGCAAGGTATTGGGAATTCATGACAATTTGCACACATTGCAATTTCATTTTCCAGGTCTACATATATAATTTTAAAAAGGCCACAATCTGTCAGAGATGTAAGAAATCATTTGTAGCTCTTGCTTATAATTATCAGGCTGCCCCATCATCTGTACCATTTGGTGCCCCAAAAGTGTCTCCGATGCAAGTTCCACCAAAACCAGCCTCAAAAAGTAGTTGTGAAACACCCTTTGGTGGTGGATTTGCACATACTTTTGTGCATATAAATCCTTCATATATGAAAACATGTCCTAATGGAGTTGCTAAGCAACATATAGATGAAGAGAGCAAGGATGGCTATGTTCCTGTGTCCAAACCAACAGAGTCACAATCGTCAAACAATGTTGGAAGTAAGAGAGTGAGACAACCAGAAAACCATGAAGATGACGATTATGCAGATATTTCTTCCAAAAAGCCACGACAAAACAAATCATTGAACAAAGAAAACTATGAAGGTGACGATTATGCAGATATTTCTAGTCCAGAGGTCATTGATCATGCTTATCCAGATTTCAATAATTTTGAGAAGGACAAGGCAGATGATTGTTTTGGTGTTAAATTTGAAAAGTGTTCTGAGAGGATTTGA 1353 0.3999 MECNKDEAVRVKQLAETKMQTGEFVEALKFANKAKKLYADAENIAQILAVCEVHNAALNKLSMSEMDWYGILQAESLSEEAIIRKQYRKLALLLHPDKNKFAGAEAAFKMIGEANSLLTDKAKRSLYDMKVKGHVRHAVPKTSYHHSNGNVYADKNLAECLKKYSSMRSCWTICTHCNWDQFSTYTMNKAPLCRYCKKSFIPVDTSKQAGPSSVPFRAPKVAAMQAPQPFHHTNSAANQVPNAARYWEFMTICTHCNFIFQVYIYNFKKATICQRCKKSFVALAYNYQAAPSSVPFGAPKVSPMQVPPKPASKSSCETPFGGGFAHTFVHINPSYMKTCPNGVAKQHIDEESKDGYVPVSKPTESQSSNNVGSKRVRQPENHEDDDYADISSKKPRQNKSLNKENYEGDDYADISSPEVIDHAYPDFNNFEKDKADDCFGVKFEKCSERI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03354 450 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Mepo4g03354 450 Gene3D DnaJ domain 53 150 IPR036869 -
Mepo4g03354 450 MobiDBLite consensus disorder prediction 354 414 - -
Mepo4g03354 450 CDD DnaJ 67 120 IPR001623 -
Mepo4g03354 450 MobiDBLite consensus disorder prediction 359 375 - -
Mepo4g03354 450 SUPERFAMILY Chaperone J-domain 58 132 IPR036869 -
Mepo4g03354 450 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Mepo4g03354 450 MobiDBLite consensus disorder prediction 376 410 - -
Mepo4g03354 450 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mepo4g03354 450 PRINTS DnaJ domain signature 87 102 IPR001623 -
Mepo4g03354 450 PRINTS DnaJ domain signature 103 123 IPR001623 -
Mepo4g03354 450 Pfam DnaJ domain 67 128 IPR001623 -
Mepo4g03354 450 SMART dnaj_3 66 123 IPR001623 -
Mepo4g03354 450 PANTHER BNAC03G44070D PROTEIN 248 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03354 Mepo-Chr4 43103648 43105201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03354 4 200 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.858 9.42e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03354 - - gmx:102662460 305.449