Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03335 ATGGGTTGTGTAATTAGCCGAGAAGTGGAATCGGGTATTGTATCTGAGGTGAAGGAAGAGAAGAATTTGAGAGCTGAGTCGAGCAAGAGAGTTGAAGAATTGTCGACGAGTAGAGCTGAGGGAAGTGTAGTAGAGGTTCAGAATGGTGAAAAGGTGAAGAAGGTTAAGGAGAAGGAGGAGAAGAGTGACGGTGATGGGGTTCAACGGCCAAAGGGTGAGAGGAGAAGATCGAAGCCAAACCCGAGGTTGAGTAACCCGCCAAAGAATTTGCAAGGGGAGCAAGTAGCAGCTGGATGGCCGTCCTGGCTTACGGCAGTTTGTGGGGAAGCCCTTAATGGGTGGATTCCGCGAAAGGCTGATACATTTGAGAAAATAGATAAGATCGGTCAAGGAACATATAGTAATGTGTACAAAGCTAAAGATTTAATAACGGGTAAGATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAACCCGAGAGTGTAAAATTCATGGCTAGAGAGATCCTTATACTGCGAAGATTGGATCATCCCAATGTTATAAAGTTAGAAGGTTTAGTTACATCTAGAATGTCATGGAGTTTGTATCTGGTGTTTGAATACATGGTACATGATTTAGCTGGACTTGCTGCAAGCCCTGACATCAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAACTGCTATCAGGACTGGAGCACTGTCATAATAGACATGTACTTCACCGCGATATTAAAGGATCAAATCTTCTGATTGACAACGAAGGAATACTCAAAATTGCTGACTTTGGACTTGCATCTTTCTTTGATCCAACCCGCAGGCATCCTATGACTAATCGTGTGGTTACCCTTTGGTACCGACCTCCTGAGTTGCTTCTCGGTGCCACAGATTATGGTGTGGGTGTGGACCTTTGGAGTGCCGGTTGCATTTTAGGAGAGTTATTGTATGGGAAACCAATTATGCCTGGTCGTACAGAGGTGGAACAACTGCATAAGATATACAAGCTTTGCGGTTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCCAATGCTACCTTGTTCAAACCTCGAGAGCCATACAAAAGATGCATAAGAGATGTATTTAAAGAATTTCCACCTTCTGCTCTTCCCCTTGTCGATACTCTTCTTGCTATTGATCCAATAGAACGGAAGAGTGCCTCGGATGCTCTAAGAAGTGAGTTCTTTAACACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCGAAGTATCCTCCAACCAAGGAAATGGATGTTAAACGGCGTGACGATGAAGCCAGAAGATCAAGAGCTGCTGCCAAAGCTCGAGCTGATGGAGGAAAGAAGCATCGGACACGTGAACGAGCTGTAAAAGCTGCTCCGGCTCCTGAAGCCAATGCTGAGCTTCAATACAATATCGATAGAAGGCGTCTAATCACTCATGCTAATGCTAAGAGCAAGAGTGAAAAGTTTCCTCCGCCGCATGAAGATGGACAACTTGGATTTCCTTTGGGAGCTTCAAATCATATTGATCCAGATATAGTTCCTCATGATGTCTCTTTGGATTCAATGTCATATACCTTTTCAAAGGAACCATTTCAAGCTTATTCAGGTCCCATAGGTAATACTACTAGCAATGGTTTCACAAAGCGGAAGAAAAACACTGCGAATGATGCATTGGATTTATCAAAACCATATAAAGGAACCCACAAGGATAAGGGTAAAGGAAAGAAAATCATAGCTTAA 1755 0.4319 MGCVISREVESGIVSEVKEEKNLRAESSKRVEELSTSRAEGSVVEVQNGEKVKKVKEKEEKSDGDGVQRPKGERRRSKPNPRLSNPPKNLQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDLITGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSWSLYLVFEYMVHDLAGLAASPDIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPTRRHPMTNRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLYGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRDVFKEFPPSALPLVDTLLAIDPIERKSASDALRSEFFNTEPYACDPSSLPKYPPTKEMDVKRRDDEARRSRAAAKARADGGKKHRTRERAVKAAPAPEANAELQYNIDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGASNHIDPDIVPHDVSLDSMSYTFSKEPFQAYSGPIGNTTSNGFTKRKKNTANDALDLSKPYKGTHKDKGKGKKIIA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03335 584 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03335 584 Gene3D Transferase(Phosphotransferase) domain 1 205 446 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 542 584 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 557 572 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 416 466 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 542 556 - -
Mepo4g03335 584 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03335 584 FunFam probable serine/threonine-protein kinase At1g54610 205 446 - -
Mepo4g03335 584 CDD STKc_CDK9_like 122 406 - -
Mepo4g03335 584 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Mepo4g03335 584 SMART serkin_6 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03335 584 MobiDBLite consensus disorder prediction 424 461 - -
Mepo4g03335 584 SUPERFAMILY Protein kinase-like (PK-like) 116 412 IPR011009 -
Mepo4g03335 584 FunFam probable serine/threonine-protein kinase At1g54610 109 204 - -
Mepo4g03335 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Mepo4g03335 584 MobiDBLite consensus disorder prediction 20 36 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 20 94 - -
Mepo4g03335 584 PANTHER CELL DIVISION PROTEIN KINASE 120 410 - -
Mepo4g03335 584 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Mepo4g03335 584 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03335 Mepo-Chr4 42942438 42949664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03335 114 444 Core Cell Cycle Gene Families AT5G10270 52.738 6.91e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo4g03335 Pkinase 3.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03335 K08819 - gmx:100817289 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04051 3 49794321 49799266 Mepo4g03335 4 42942438 42949664 PCT