Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g03335 | ATGGGTTGTGTAATTAGCCGAGAAGTGGAATCGGGTATTGTATCTGAGGTGAAGGAAGAGAAGAATTTGAGAGCTGAGTCGAGCAAGAGAGTTGAAGAATTGTCGACGAGTAGAGCTGAGGGAAGTGTAGTAGAGGTTCAGAATGGTGAAAAGGTGAAGAAGGTTAAGGAGAAGGAGGAGAAGAGTGACGGTGATGGGGTTCAACGGCCAAAGGGTGAGAGGAGAAGATCGAAGCCAAACCCGAGGTTGAGTAACCCGCCAAAGAATTTGCAAGGGGAGCAAGTAGCAGCTGGATGGCCGTCCTGGCTTACGGCAGTTTGTGGGGAAGCCCTTAATGGGTGGATTCCGCGAAAGGCTGATACATTTGAGAAAATAGATAAGATCGGTCAAGGAACATATAGTAATGTGTACAAAGCTAAAGATTTAATAACGGGTAAGATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAACCCGAGAGTGTAAAATTCATGGCTAGAGAGATCCTTATACTGCGAAGATTGGATCATCCCAATGTTATAAAGTTAGAAGGTTTAGTTACATCTAGAATGTCATGGAGTTTGTATCTGGTGTTTGAATACATGGTACATGATTTAGCTGGACTTGCTGCAAGCCCTGACATCAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAACTGCTATCAGGACTGGAGCACTGTCATAATAGACATGTACTTCACCGCGATATTAAAGGATCAAATCTTCTGATTGACAACGAAGGAATACTCAAAATTGCTGACTTTGGACTTGCATCTTTCTTTGATCCAACCCGCAGGCATCCTATGACTAATCGTGTGGTTACCCTTTGGTACCGACCTCCTGAGTTGCTTCTCGGTGCCACAGATTATGGTGTGGGTGTGGACCTTTGGAGTGCCGGTTGCATTTTAGGAGAGTTATTGTATGGGAAACCAATTATGCCTGGTCGTACAGAGGTGGAACAACTGCATAAGATATACAAGCTTTGCGGTTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCCAATGCTACCTTGTTCAAACCTCGAGAGCCATACAAAAGATGCATAAGAGATGTATTTAAAGAATTTCCACCTTCTGCTCTTCCCCTTGTCGATACTCTTCTTGCTATTGATCCAATAGAACGGAAGAGTGCCTCGGATGCTCTAAGAAGTGAGTTCTTTAACACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCGAAGTATCCTCCAACCAAGGAAATGGATGTTAAACGGCGTGACGATGAAGCCAGAAGATCAAGAGCTGCTGCCAAAGCTCGAGCTGATGGAGGAAAGAAGCATCGGACACGTGAACGAGCTGTAAAAGCTGCTCCGGCTCCTGAAGCCAATGCTGAGCTTCAATACAATATCGATAGAAGGCGTCTAATCACTCATGCTAATGCTAAGAGCAAGAGTGAAAAGTTTCCTCCGCCGCATGAAGATGGACAACTTGGATTTCCTTTGGGAGCTTCAAATCATATTGATCCAGATATAGTTCCTCATGATGTCTCTTTGGATTCAATGTCATATACCTTTTCAAAGGAACCATTTCAAGCTTATTCAGGTCCCATAGGTAATACTACTAGCAATGGTTTCACAAAGCGGAAGAAAAACACTGCGAATGATGCATTGGATTTATCAAAACCATATAAAGGAACCCACAAGGATAAGGGTAAAGGAAAGAAAATCATAGCTTAA | 1755 | 0.4319 | MGCVISREVESGIVSEVKEEKNLRAESSKRVEELSTSRAEGSVVEVQNGEKVKKVKEKEEKSDGDGVQRPKGERRRSKPNPRLSNPPKNLQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDLITGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSWSLYLVFEYMVHDLAGLAASPDIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPTRRHPMTNRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLYGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRDVFKEFPPSALPLVDTLLAIDPIERKSASDALRSEFFNTEPYACDPSSLPKYPPTKEMDVKRRDDEARRSRAAAKARADGGKKHRTRERAVKAAPAPEANAELQYNIDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGASNHIDPDIVPHDVSLDSMSYTFSKEPFQAYSGPIGNTTSNGFTKRKKNTANDALDLSKPYKGTHKDKGKGKKIIA | 584 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g03335 | 584 | ProSiteProfiles | Protein kinase domain profile. | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo4g03335 | 584 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 446 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 542 | 584 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 557 | 572 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 416 | 466 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 542 | 556 | - | - | |
Mepo4g03335 | 584 | Pfam | Protein kinase domain | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo4g03335 | 584 | FunFam | probable serine/threonine-protein kinase At1g54610 | 205 | 446 | - | - | |
Mepo4g03335 | 584 | CDD | STKc_CDK9_like | 122 | 406 | - | - | |
Mepo4g03335 | 584 | ProSitePatterns | Protein kinases ATP-binding region signature. | 128 | 151 | IPR017441 | GO:0005524 | |
Mepo4g03335 | 584 | SMART | serkin_6 | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 424 | 461 | - | - | |
Mepo4g03335 | 584 | SUPERFAMILY | Protein kinase-like (PK-like) | 116 | 412 | IPR011009 | - | |
Mepo4g03335 | 584 | FunFam | probable serine/threonine-protein kinase At1g54610 | 109 | 204 | - | - | |
Mepo4g03335 | 584 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 242 | 254 | IPR008271 | GO:0004672|GO:0006468 | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 20 | 36 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 20 | 94 | - | - | |
Mepo4g03335 | 584 | PANTHER | CELL DIVISION PROTEIN KINASE | 120 | 410 | - | - | |
Mepo4g03335 | 584 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 204 | - | - | |
Mepo4g03335 | 584 | MobiDBLite | consensus disorder prediction | 47 | 80 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g03335 | Mepo-Chr4 | 42942438 | 42949664 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g03335 | 114 | 444 | Core Cell Cycle Gene Families | AT5G10270 | 52.738 | 6.91e-121 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Mepo4g03335 | Pkinase | 3.1e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g03335 | K08819 | - | gmx:100817289 | 949.503 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo3g04051 | 3 | 49794321 | 49799266 | Mepo4g03335 | 4 | 42942438 | 42949664 | PCT |