Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03331 ATGAGTGAAAGAGGGAAGAAAGAAAGAATGAAGAACATCTTCAAGAAGCTTCATATAGGTAGCAGTAACCACGATCCTAATCGATCCAACGAAACTCCGCCACGTGTATCATCGCCAACCAATGACGCTCAGAGTTCCGCCGCTGCCGCTTCTACAGTAATTCCTTCGTCTTCGCCGTCGGGGACAGGAGTTGCTGCTGCTGCTTCCGGTGGTGGTGGTGGTGGTTTGTCTGCGATGGTTAATCGGCAGGATTTTTTCTCTTCGGAGGAGGAGTTTCAGGTGCAGTTAGCCCTAGCTATTAGTGCTTCCAATTCGGAGTTTCGTGGTGGTGATGATCCGGAGAAGGATCAGATCCATGCGGCAACGATGCTTAGTTTGGGAGGAAATCGAATTGATTCGACGCGGAGTAAGGATGATGTGGCGGAGGCGCTTTCCAGGCAGTATTGGGAATACAATGTGCTTGACTATGAAGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCTCTCTAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAGCAAACCCAGGTGGTTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAATCGATCCTGCCCTCGAAGAGCTGGTGCAAATTGCACAATGTATATCATTGGACTGCCCTGTCACTGAGATTGGTATTTTTGTACAAAGGCTTGCTGAACTAGTTACTAGCCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTGGCAAGATGGACTGAAAGAAGTACACAGTTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGTGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCGGCTGATATTTTAAATGCAAAGGATAATGCTTTTAAGCCTTACAACCCCAAGATTGTGCCGAGTTTGCCTTCCAGTGTGGAAACTGAGCTTTCTTACTCAAAACCTATACCACCATCTAATGGTGAAGGCAGTAGTCAAACTTCTGTGATAAAAGGTCATACACCGTCTTGGAATGGAAAATCGTATACCGAGAAGTCAGAGTATATGCCTTCAAACTTTGGTTTGAGCACAGACGCTGGTGTTGGTCCTTCTAAAATTCCCAATAAAGGCAGTCCTAATCAACGGGAAAATTTGCCACCCTCATATGGTAATTCTCTGTACAAAGGTACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCGTATGCACAGAACACCCACAATGACCCTCAGAACCTTTTTGCAGATCTGAACCCTTTCTTGATAAAAGGGACTGGGAAGCCCTCTGTGCATAACAAACCTGTGGAAAATAAACCTCTTGAGTATGGTACAAAAAACAATACCATTTCTGGTCGACCCGTGTCGCCATTGATGTGGAAGAATCGGCATGCCTTCAACGAAGTCCCTAGGAAAACTAATCAGAACCCTAATGAATATAAACCTCCTTTATTTGTTTCCAATATTTCTTCCACATCTGGAAATACTGATCTCAGCACTTCCAATTCATCATACAATTCAAATATAAATAATCATATTAATTCTCAAACTTCGGCACAAATTACTGGTTCAGTCTCTCCAGCTGGTGTAAGTGAACTGAACCGGACTGAGGGTCTCAATGCTGATTTTAAAAGGGGTGGTTTGGGAAGTTCCCAAAATGTCTTGTTAGATGCGGTTAACGAACCCGAAAACACTGAGCTCAGACATCATGACAGGAGGAAGTGCACACATGACAGATTCATGGGAAGCAATTTCCAATTAAAAGATTCAGATAGACCTAGCTCTTCAATCGATTCCATTACAAATAGAGCCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAAGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTCTACCGTGCAGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCGTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTCACTCGGCCGCCCAACCTCTCAATCATTTCAGAGTTTCTCCCAAGAGGAAGCTTGTACCGAATTCTTCATCGGCCAAATTGTCAGATCAATGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAATTGCTTGCACGCCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTAGTTGATAATAATTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGATTGAAGCATAACACATTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCTTCAAATGAGAAGTGTGATGTTTACAGTTTCGGTGTTATCCTATGGGAGCTGGCCACTCTTAGGTTGCCATGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTAGGTTTCCAAAATCGTCGCCTTGAAATTCCTATGGAACTTGATCCTTTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCGTTTGCACAGCTCACAGTGGCTCTTAAGCCCTTGCAGCGTCTGGTTATCCCATCTCATCAGGATCAGGTAGCTTCACCTTTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2913 0.4363 MSERGKKERMKNIFKKLHIGSSNHDPNRSNETPPRVSSPTNDAQSSAAAASTVIPSSSPSGTGVAAAASGGGGGGLSAMVNRQDFFSSEEEFQVQLALAISASNSEFRGGDDPEKDQIHAATMLSLGGNRIDSTRSKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLSNDPAMQGKMPSLADLEANPGGSSFEVVIVNRTIDPALEELVQIAQCISLDCPVTEIGIFVQRLAELVTSHMGGPVKDANIILARWTERSTQLRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNAKDNAFKPYNPKIVPSLPSSVETELSYSKPIPPSNGEGSSQTSVIKGHTPSWNGKSYTEKSEYMPSNFGLSTDAGVGPSKIPNKGSPNQRENLPPSYGNSLYKGTLGMNAVGDGTRLNVNVVPYAQNTHNDPQNLFADLNPFLIKGTGKPSVHNKPVENKPLEYGTKNNTISGRPVSPLMWKNRHAFNEVPRKTNQNPNEYKPPLFVSNISSTSGNTDLSTSNSSYNSNINNHINSQTSAQITGSVSPAGVSELNRTEGLNADFKRGGLGSSQNVLLDAVNEPENTELRHHDRRKCTHDRFMGSNFQLKDSDRPSSSIDSITNRADQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQINEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPMELDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVASPLPQEISVNSTP 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03331 970 ProSitePatterns Protein kinases ATP-binding region signature. 695 717 IPR017441 GO:0005524
Mepo4g03331 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Mepo4g03331 970 PRINTS Tyrosine kinase catalytic domain signature 802 820 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 PRINTS Tyrosine kinase catalytic domain signature 763 776 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 PRINTS Tyrosine kinase catalytic domain signature 849 859 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 PRINTS Tyrosine kinase catalytic domain signature 868 890 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 PRINTS Tyrosine kinase catalytic domain signature 912 934 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 MobiDBLite consensus disorder prediction 1 73 - -
Mepo4g03331 970 SUPERFAMILY Protein kinase-like (PK-like) 680 960 IPR011009 -
Mepo4g03331 970 CDD STKc_MAP3K-like 695 938 - -
Mepo4g03331 970 SMART serkin_6 689 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03331 970 Gene3D Phosphorylase Kinase; domain 1 682 766 - -
Mepo4g03331 970 FunFam PAS domain-containing protein tyrosine kinase family protein 767 957 - -
Mepo4g03331 970 Gene3D Transferase(Phosphotransferase) domain 1 768 950 - -
Mepo4g03331 970 Pfam Ethylene-responsive protein kinase Le-CTR1 141 339 - -
Mepo4g03331 970 Pfam Protein tyrosine and serine/threonine kinase 690 939 IPR001245 GO:0004672|GO:0006468
Mepo4g03331 970 ProSiteProfiles Protein kinase domain profile. 689 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03331 970 MobiDBLite consensus disorder prediction 369 440 - -
Mepo4g03331 970 MobiDBLite consensus disorder prediction 495 522 - -
Mepo4g03331 970 MobiDBLite consensus disorder prediction 23 64 - -
Mepo4g03331 970 MobiDBLite consensus disorder prediction 369 413 - -
Mepo4g03331 970 FunFam Serine/threonine-protein kinase isoform 1 680 767 - -
Mepo4g03331 970 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03331 Mepo-Chr4 42882225 42889787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03331 10 925 MAP Kinase Kinase Kinase AT1G08720 55.567 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mepo4g03331 PK_Tyr_Ser-Thr 5.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03331 - - aprc:113870732 1548.49