Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03302 ATGTATGATGGAGTCCCTGACCAATTCCACCAATTCATAACTCCAAGAACTTCTTCATCATCACTTCCTCTTCACTTACCTTTCCCTCTTTCAACACCAAACAATACTTTCCCTCCTTTTGATCCTTATAATCAACAGAACCACCCTTCTCAACATCATCAATTGCCACTCCAAGTTCAACCTAATCTCTTGCACCCTTTACACCCTCACAAAGATGATGAAGATAAGGAACAAAACACTACACCTTCAATGAACAACTTCCAAATTGAAAGAGATCAAAGACAAATACTTCCTCAACTCATTGATCCTTGGACTAATGATGAAGTTCTTGCACTTTTGAAGATCAGATCCAGCATGGAGAGTTGGTTCCCAGATTTCACTTGGGAACATGTCTCAAGGAAGCTAGCTGAGGTTGGTTATAAACGAAGTGCTGAAAAATGCAAGGAAAAATTTGAAGAAGAAAGCAGATTCTTCAACAACATTAATCATAATCAAAATAGTTTTGGTAAGAATTTTAGGTTTGTTACTGAGCTGGAAGAGGTTTATCAAGGTGGTGGGGGTGAAAATAACAATAACCAAGTAGAGGCTGAAAAGGCAAACGAGGTGCAAGACAAAATGGACCCTCATGAAGAGGATTCAAGAATGGATGACGTATTGGTGTCAAAGAAAAGTGAAGAAGAGGTAGTTGAGAAAGGTACTACAAATGATGAGAAGAAGAGGAAAAGATCAGGTGATGATAGATTTGAAGTGTTTAAGGGTTTTTGTGAGAGTGTGGTGAAGAAAATGATGGATCAACAAGAAGAAATGCATAACAAGCTTATTGAAGATATGATTAAAAGAGATGAAGAGAAATTTAGTAGAGAAGAAGCATGGAAGAAACAAGAGATGGAGAAAATGAACAAAGAGCTTGAGTTGATGGCACATGAACAAGCTATTGCTGGTGATAGACAAGCACACATAATTCAATTCTTGAACAAATTCTCAACAAGTGCTAATTCTTCTTCACTAGCTTCAATGTCATCTTCACTTCAAGCTTATTTAGCAACATTAACTTCAAACTCTTCTTCTACATTGCACTCACAAAACCCTAATCCTGAAGTTCTTGAAAAAACTCTTCAACCAATACCTGAAAACCCTAGCTCAGCCATTCCTTCTTCTTCTACTACTTTGGTGGCTCAGCCTCGCAAGAACAACCCTATTTCTTCATATAGCCTTATATCTAGCGGCGAGAGAGACGATATTGGTAGAAGATGGCCAAAAGATGAAGTTTTGGCATTGATAAACTTGAGGTGCAACAACAACAATGAAGAAAAGGAAGGAAACAATAACAACAAAGCACCACTTTGGGAGAGAATTTCACAAGGAATGCTGGAGTTAGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAATATAAACAAGTACTTCAGAAAAACAAAGGATGCTAATAGGAAAAGGTCACTTGATTCAAGAACTTGTCCATACTTTCATCTATTGAGCAATCTTTATAACCAAGGTAAACTTGTTCTTCAATCTGATCAAAAGCAAGAAAGCAATAACGTGAATGTGCCTGAAGAAAATGTGGTAATTCAAGAGAAAGCAACACCAGATGAAAACCAAGATGGTGGAGGTGAGTCTTCACAAGTGGGGCCTCCAAGCTGGTAA 1674 0.3805 MYDGVPDQFHQFITPRTSSSSLPLHLPFPLSTPNNTFPPFDPYNQQNHPSQHHQLPLQVQPNLLHPLHPHKDDEDKEQNTTPSMNNFQIERDQRQILPQLIDPWTNDEVLALLKIRSSMESWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINHNQNSFGKNFRFVTELEEVYQGGGGENNNNQVEAEKANEVQDKMDPHEEDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFCESVVKKMMDQQEEMHNKLIEDMIKRDEEKFSREEAWKKQEMEKMNKELELMAHEQAIAGDRQAHIIQFLNKFSTSANSSSLASMSSSLQAYLATLTSNSSSTLHSQNPNPEVLEKTLQPIPENPSSAIPSSSTTLVAQPRKNNPISSYSLISSGERDDIGRRWPKDEVLALINLRCNNNNEEKEGNNNNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRSLDSRTCPYFHLLSNLYNQGKLVLQSDQKQESNNVNVPEENVVIQEKATPDENQDGGGESSQVGPPSW 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03302 557 FunFam Trihelix transcription factor GT-2 418 481 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 516 557 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 33 52 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 63 83 - -
Mepo4g03302 557 SMART sant 100 157 IPR001005 -
Mepo4g03302 557 SMART sant 414 478 IPR001005 -
Mepo4g03302 557 FunFam Trihelix transcription factor GT-2 104 160 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 197 243 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 543 557 - -
Mepo4g03302 557 Pfam Myb/SANT-like DNA-binding domain 102 180 IPR044822 -
Mepo4g03302 557 Pfam Myb/SANT-like DNA-binding domain 416 503 IPR044822 -
Mepo4g03302 557 Gene3D - 418 481 - -
Mepo4g03302 557 Gene3D - 104 159 - -
Mepo4g03302 557 CDD GT1 416 483 - -
Mepo4g03302 557 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Mepo4g03302 557 PANTHER FI21293P1 54 541 - -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 371 395 - -
Mepo4g03302 557 ProSiteProfiles Myb-like domain profile. 417 476 IPR001005 -
Mepo4g03302 557 MobiDBLite consensus disorder prediction 198 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03302 Mepo-Chr4 42587886 42590437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03302 1 508 Trihelix Transcription Factor Family AT5G28300 40.508 1.31e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g03302 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03302 - - tpra:123903108 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03302 4 42587886 42590437 Mepo4g03302 4 42587886 42590437 ECH
Mepo3g04078 3 50017354 50019287 Mepo4g03302 4 42587886 42590437 PCT