Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03301 ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCAGCTCTTCTTGTGAGACATAAACATGAGAAGAAAAAATATGTGTTGAAGAAGATTAGACTTGCCCGCCAAACGGAGCGGTCTCGCAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAATTACGAAACCCATTCATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTCTGCATAATTATAGGTTACTGTGAGGGTGGAGATATGGCGGAAGCTATAAAGAAGACTAATGGTGTTCTGTTTCCCGAGGAGAAACTTTGCAAGTGGCTCGTTCAACTTCTTATGGCACTTGACTACTTGCACATGAATCACATTCTTCATCGCGATGTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATAAGATTGGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTACTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAGTCAGATATTTGGTCCTTGGGATGTTGTATATACGAAATGGCAGGACACAAGCCTGCATTCAAAGCATTTGATATACAAGCATTGATTATCAAGATTAGTAAGTCCATAGTGGCTCCGCTACCAACAAAATATTCTAGTTCATTTCGAAGTCTGGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTGAGGCCCAGTGCTTCTGAGCTTCTTGGGCACCCACATCTTCAATCTTATGTTCTAAAGATCCATCTCAAACTCAATAGCCCCAGGCGAAATACATTGCCTGCTCATTGGCAAGAGTCAAAGTACACGAAGAAAACTAGATTTTTAGTTCCAGAAGACACTGTTAGGGATAAGCGCTATTCTTACAGTAACGACCGCACTCTAAATCCTAGCGTATCTGGAGCTGATCAAGATTCTGTATGCTCTACCCTAGAAATAGGTTGTACTCCTGATCACTTGAATCAAAGGTTAGCAGAATTATGTACAGGTGATAGCCGTGACCTGAAGTCGGTCCATAAACCTGTTGTTTCCAGAACTTCTAGTATTGCTAAGGCTCCAAAGTTCACTTCATCAAAAGTTTCTAGCACCAACAGAAAATCAATGGAATCCTCTAACAATCGTAAGGTAGTAAAGCAAACTCTTCCTGTTTCACACAGCATCACAAAATCTGCTCATACAAATCGCAGAGCATCATTTCCTTTGTCAACAAGGGGTGGTATTCAGGAACCTTCCAGGAAGAGTGTTGGTTTGCTTAGCCATGTGTCTTCACCTGATATCTCAGTTAACTCTCCCCGTATCGATAGGATAGCTGAATTCCCATTATCATCATATGATGATTGTTTGTTCCCTGTCAATAAGACGTCAACCTCTGCACAAGGTTCCTCAGGATTCCCATCTCATTCAACTGTGATAGACAAATGCACAATAGAGGTATGTGATAGAGCCTCTGTTAAGCCTAGTTCTACGGATGATTGGCAGGGAATCAAGCGCAGCATGTTAAAGGAAATTCATGAAGATAAAAGTGGTTCCTCTGATCAAAATGCAACGGCAGGTGCATCAAGCTACACATCTTCAGACTTGCAGCGCCGTCAGTTTGACACTTCATCTTTCCAACAAAGGGCTGAAGCCTTAGAAGGTTTGCTTGAATTTAGTGCAAGATTGCTCCAGCAAGCAAGGTATGATGAACTAGGAGTTTTGTTGAAACCATTTGGTCCCGAGAAAGTTTCTCCAAGAGAAACTGCTATCTGGTTGAGCAAGAGCTTCAAAGGGAACACTAACAACACAGAAGAATCCCCGTAA 1851 0.4198 MEQYEVLEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKTNGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAGHKPAFKAFDIQALIIKISKSIVAPLPTKYSSSFRSLVKSMLRKNPELRPSASELLGHPHLQSYVLKIHLKLNSPRRNTLPAHWQESKYTKKTRFLVPEDTVRDKRYSYSNDRTLNPSVSGADQDSVCSTLEIGCTPDHLNQRLAELCTGDSRDLKSVHKPVVSRTSSIAKAPKFTSSKVSSTNRKSMESSNNRKVVKQTLPVSHSITKSAHTNRRASFPLSTRGGIQEPSRKSVGLLSHVSSPDISVNSPRIDRIAEFPLSSYDDCLFPVNKTSTSAQGSSGFPSHSTVIDKCTIEVCDRASVKPSSTDDWQGIKRSMLKEIHEDKSGSSDQNATAGASSYTSSDLQRRQFDTSSFQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPEKVSPRETAIWLSKSFKGNTNNTEESP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03301 616 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mepo4g03301 616 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03301 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo4g03301 616 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Mepo4g03301 616 MobiDBLite consensus disorder prediction 371 392 - -
Mepo4g03301 616 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mepo4g03301 616 MobiDBLite consensus disorder prediction 521 550 - -
Mepo4g03301 616 FunFam Serine/threonine-protein kinase Nek3 86 328 - -
Mepo4g03301 616 Gene3D Transferase(Phosphotransferase) domain 1 86 315 - -
Mepo4g03301 616 SUPERFAMILY Protein kinase-like (PK-like) 1 299 IPR011009 -
Mepo4g03301 616 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03301 616 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 566 - -
Mepo4g03301 616 CDD STKc_Nek 3 258 - -
Mepo4g03301 616 MobiDBLite consensus disorder prediction 527 550 - -
Mepo4g03301 616 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03301 Mepo-Chr4 42563691 42569951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03301 10 260 MAP Kinase Kinase Kinase AT1G53570 32.812 1.04e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mepo4g03301 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03301 K08857 - gmx:100804898 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03301 4 42563691 42569951 Mepo4g03301 4 42563691 42569951 ECH